| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2549 |
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| Symbol | |
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| ID | 8726294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3079711 |
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| End bp | 3082851 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003387366 |
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| Protein GI | 284037436 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0595471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0930113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT TCATCAGTAA CGTAGTCGGT TTTTCGCTGA AGAACCGCTT CTTTATCTTT
TTCATGACGG CGGGGCTCGT TATTGCCGGT ATCGTCAGTT ACTTAAAAAC ACCCCTTGAG
GCTTTCCCGG ACGTAACAAA CACGCAAATC ATTGTGGTTA CTGAATGGAA TGGGCGCTCG
GCCGAAGAGG TAGAGCGGTT TGTGACCGTA CCCATCGAGG TGGCCATGAA CTCGGTGCAG
CGAAAGAGTA ATGTCCGGTC AACGACCATG TTTGGGTTGT CGGTGATGAA GATTATTTTC
GATGATGATG TCGAGGATTT TTTCGCCCGG CAGCAGGTCA ACAATCTCCT GCGCAACGTA
TCCCTGCCGG AAGGGGTTGA GCCGGAGGTA CAGCCGCCTT ACGGGCCAAC AGGCGAAATA
TTCCGGTACA CACTGGAAAG CAAAGACCGT GACAGCCGCG AGCTGCTTAC CCTGCAAAAC
TGGGTCGTTG ACCGGCAGAT GCGCAGTGTA CCGGGTGTTG CCGATATAGT GGCTTTCGGC
GGGCGGGAGA AGATGTACGA ACTGCGCGTC AACCCGACCC AGCTCGCCAA ATACGACATC
ACCCCGCTGG ATGTCTATCA GGCCGTTACC CGAAGCAATA TCAATGTGGG GGGCGATGTC
ATTGAGCGGA ACGGGCAGGC GTATGTAGTC CGGGGTGTTG GCCTCCTGAC GTCCATTCAG
GATATCGAGA ACATACTGAT CGAAGAAGCC GGTGGTAACC CGGTGCTGGT AAAGAATGTG
GCCGAAGTAG CCGAATCGAA CCTGCCCCGT GTGGGGCAGG TGGGTCTGGA TTCGAATGAT
GATGTAGTTG AAGGCATCAT CGTGATGCGG AAAGGCGAAA ATCCCAGTGA GGTACTGACT
CGGGTAAAAG ACAAAATAGA GGAATTAAAC ACGCGCGTAC TGCCATCGGA TGTAAAGATG
GTGACGTTCT ACGACCGCGA TAACCTTATT GAGTTTTGTA CCCAAACGGT GCTGCACAAC
CTCACGGAGG GTATTGTCCT CGTAACGGTC ATCGTTTTCC TGTTCATGGC CGATTGGCGC
ACGACCCTGA TCGTATCCAT CATTATTCCG TTAGCTCTCC TGTTTGCGTT CATGTGTCTA
CGGCTGCGGG GCATGTCGGC CAACCTGCTG TCCATGGGCG CCGTTGATTT CGGAATTATC
ATCGATGGGG CTGTCGTCAT GGTCGAGGGG ATATTTGTCA CGCTCGACCA CTTGGCGCAT
CGGGTGGGTA TGAACCGGTA TAACCGTATG GCTAAGCTGG GCCTGATTCG GAAAACGGGT
GGAGAACTGG GTAAAGCGGT TTTCTTCTCG AAACTGATTA TCATAACGGC GCTGCTGCCT
ATTTTTTCCT TCGAGAAAGT GGAGGGTAAA ATGTTTTCAC CCCTGGCCTG GACACTCGGC
TTTGCGCTGC TGGGCGCGCT GCTGTTTACC CTGACGCTGG TGCCGGTACT GTGCTCGATG
CTGCTGAAGA AAAACGTTCG GGAGAAAAAG AACCCCATTG TCAATTTCTT CGATCGTATT
GTTATGGCCG GTTTCGGCTG GTGCTACCGC AACCGTCGGC TGAGTCTGGT TGGCGCGATT
AGCTTCATGA TCGCTACATT TTTTTCGTCC AGTATGCTGG GCACCGAGTT CCTGCCCCAA
CTCAACGAAG GTGCACTGTG GGTGACAGCA GAGCTGCCGA TGAGTATGTC GCTGCCCGAA
AGTGTCGATA TGGCCAAAAC CATCCGGGAA GACCTGAACA CCTTTCCCGA GGTGAAGCAG
GTGCTTTCGC AGGTGGGCCG GTCCAACGAC GGTACGGACC CTAATGGGTT TTATTTCTGC
CAGTTCCAGG TCGATCTAAA ACAGAAAGGG GAGTGGCCCG AACGACGGCT CGGACGCCGA
TTAACCGACG AACAACTCAC CGATGAGATG GACGCCAAAT TGAAAAATTA TGCCGGTGTG
CTCTACAATT ACTCGCAGCC GATTATTGAC AATGTGGCCG AGGCCGTAGC GGGTTATAAA
GCGAGTAACG GGATCAAGAT TTTTGGCCCG GATGTGTACG AGCTGGAGAA GTACGCCAAC
CAGGCTATGG AAGCCATCCG AAACGTGGAG GGGATCAAAG ACCTGGGAAT TATCCGCAAT
GTGGGACAGC CCGAAATGAG TGTGATGTTC CATGATCATA AAATGGCGCT TTACGGCGTA
TCGACGGCCG ATGCCCAGGC GGTCATTGAA ATGGCCATCG GTGGTAAAAC AGCCTCCATT
CTGTATGAGG GGGAACGAAA GTTCGATATC CGGGTGCGTT TTCAACCCGA GTATCGAAAA
AGTGAGGAGG ATATTATGCA GTTGATGGTA CCCACGATGA GTGGAGGCAA AATACCTTTG
AAAGAAATTG CGTCTATCAA GCAAATTACG GGTCCGGCGT TCATCTACCG CGATCTCAAC
AAACGATTTA TTGGGGTGAA ATTTTCTGTG CGTGGGCGCG ATTTGGGCAG TACCATTGCT
GAAGCTCAAC AGCGGGTACA GGAAAAACTT CGTCCGGAGA AAAGCTATTC AGTGGATTGG
GTAGGGGAGT TTGAGAACCA GGTTCGGGCT ACAGGGCGGC TCGGACAGGT TGTGCCGATT
AGTCTGGCGG CCATTTTCGT GATCCTGTTC ATCACCTTTG GTAATGCTAA AGATGCCGGT
CTGGTGCTGT TAAATGTGCC CTTTGCGCTC ATTGGCGGTA TTCTGGCTCT TCACGCTACG
GGCATGAACT TCGGAATTTC GGCGGGGGTT GGCTTTATTG CTCTGTTCGG CATCTGTATC
CAGAATGGCG TAATCCTGGT GTCGGTATTT AACAACAACC GAAAAGAACG AATGCCGCTC
GATGAGGCCA TTCGAACGGG GGTTCAGTCG CGTATCCGAC CGGTGGTTAT GACGGCCCTC
ATGGCAGCTA TCGGTCTGTT CCCGGCCGCC ATCTCCACCG GAATCGGGTC TGAAACACAA
AAGCCACTGG CCATTGTTGT CATCGGCGGA TTAATAACCG CAACAGTGTT AACCCTGCTT
ATTTTTCCTA TTATCTACCG ATTGTTCTAT CGAACGCAAA CACCCAAAGC GAGTAAGCGG
CTGGTATACA GCGAGGTGTA A
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| Protein sequence | MNKFISNVVG FSLKNRFFIF FMTAGLVIAG IVSYLKTPLE AFPDVTNTQI IVVTEWNGRS
AEEVERFVTV PIEVAMNSVQ RKSNVRSTTM FGLSVMKIIF DDDVEDFFAR QQVNNLLRNV
SLPEGVEPEV QPPYGPTGEI FRYTLESKDR DSRELLTLQN WVVDRQMRSV PGVADIVAFG
GREKMYELRV NPTQLAKYDI TPLDVYQAVT RSNINVGGDV IERNGQAYVV RGVGLLTSIQ
DIENILIEEA GGNPVLVKNV AEVAESNLPR VGQVGLDSND DVVEGIIVMR KGENPSEVLT
RVKDKIEELN TRVLPSDVKM VTFYDRDNLI EFCTQTVLHN LTEGIVLVTV IVFLFMADWR
TTLIVSIIIP LALLFAFMCL RLRGMSANLL SMGAVDFGII IDGAVVMVEG IFVTLDHLAH
RVGMNRYNRM AKLGLIRKTG GELGKAVFFS KLIIITALLP IFSFEKVEGK MFSPLAWTLG
FALLGALLFT LTLVPVLCSM LLKKNVREKK NPIVNFFDRI VMAGFGWCYR NRRLSLVGAI
SFMIATFFSS SMLGTEFLPQ LNEGALWVTA ELPMSMSLPE SVDMAKTIRE DLNTFPEVKQ
VLSQVGRSND GTDPNGFYFC QFQVDLKQKG EWPERRLGRR LTDEQLTDEM DAKLKNYAGV
LYNYSQPIID NVAEAVAGYK ASNGIKIFGP DVYELEKYAN QAMEAIRNVE GIKDLGIIRN
VGQPEMSVMF HDHKMALYGV STADAQAVIE MAIGGKTASI LYEGERKFDI RVRFQPEYRK
SEEDIMQLMV PTMSGGKIPL KEIASIKQIT GPAFIYRDLN KRFIGVKFSV RGRDLGSTIA
EAQQRVQEKL RPEKSYSVDW VGEFENQVRA TGRLGQVVPI SLAAIFVILF ITFGNAKDAG
LVLLNVPFAL IGGILALHAT GMNFGISAGV GFIALFGICI QNGVILVSVF NNNRKERMPL
DEAIRTGVQS RIRPVVMTAL MAAIGLFPAA ISTGIGSETQ KPLAIVVIGG LITATVLTLL
IFPIIYRLFY RTQTPKASKR LVYSEV
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