| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2519 |
|---|
| Symbol | |
|---|
| ID | 8726263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3038839 |
|---|
| End bp | 3040476 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | Gluconolactonase |
|---|
| Protein accession | YP_003387336 |
|---|
| Protein GI | 284037406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0256346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTCT GTATCATCCT CCTTTTATTC CTGCCCCAGA CACTCCCCGC GCAGGAAATT
CGGGAATTAG CCTGGGGCAA TCCTACAGCC GTTGTTGACC TCCGAAAACC GGAGAGCAGC
CAGTTAGTGA AGGCACAATG GCGCAGTCTG AACCCCAGCA TCACGCCCGC AAAATTCAAC
GCCCCCGGCC CATCGGCGAC AGATAAATTT CGGCTCTACC CCACCGGAAA GCCCATCAGC
ACGTTCACCC TTGAACCCCG CTTCGGAACG CCCGCTTTCA ACCAGTCGCC CTGGGAAACC
GTAGCGCCCA CCGATCTCGA AACCCGGCGG GGCAACGGCC TCCTAAGCCA TGTCTGGTAT
AGGACAACCG TGACCCTGCC TCAAACTGTG GGCACCTTTG CCGTCACGGG CTCGCGGGTG
TTGTTCGAGC TGGTGGCCGA CGACTACAGT GAAGTCTGGA TTAACGGCAA GCTTCGTAAA
TCATTTGGGG CGCGGGCCAA TGGCGTGATC AACGGCTACA ATGCCCGGCA GCGCGTCTGG
CTGACCGACA ACGCCAAACC CGGCGACACC TTCGACCTCT CGATTTTGGT CACCAACGGC
CCCATCGCCG ATTTACCCGA TAATTACGTC TGGATTCGGA GTGCCACGCT GGACTTCTAT
CCGACGAAGC CAATACCCGA TGCCTGGAAA AATCTGGGGC AGGTGGTCCA GATTCAGGAC
GGCTTAAAAT CGGTGATCGA CCCGGCGGTA CGCATCGAGA AAGTGGCCGA TGGGTTTCAG
TTCACGGAAG GCCCCGTTTG GCACCCCGAC GGCTACCTGC TCTTCAGCGA CCCGAATGCG
AACGTCATTT ACAAGTACGA CCCGCACCTG GGAAACGTCA GTATTTACAT GACCAAAACG
GGGTATACCG GCTACGACAT CGGCGAGTAT CACCAACCCG GCTCCAATGG ACTGGCGATT
GATCCGGCCG GGCATCTGGT GTTGTGTCAG CATGGCAACC GGCGCATCAT CCGCGATGAA
ATCAAAGGCC CCATGACGGT GCTCTCGGAT GGATACGACG GCAGAAAGCT GAACAGTCCT
AATGATCTGG TCATCAAATC GAACGGCGAT GTGTATTTTA CGGACCCGCC TTATGGCTTA
CCGAAAGCCT TTGCCGACCC GCGGAAGGAA ACACCCTATT CCGGCGTGTA CCGTATCCGA
AACGGCAAAA CAGACTTGCT CACCACCGAA CTCGGCGGTC CCAACGGCAT TGCATTCTCG
CCCGATGAGA AGTTCCTCTA CGTGTCCAAC TGGGACATCC GCGACATCCA CAACACCAAG
ACTCTCTGGC GATTTGCGGT TAAAGACGAT GGTACCTTAA GCGCCGGCAA GGTGTTCTTC
GACATGAACC AAACGGACGA CGATGAAGCA TTAGACGGCA TCAAGGTCGA TACAAAAGGA
AACATTTTCG TATCGGCACC GGGTGGTGTC TGGATTATCT CGCCAACGGG GCAGTATCTG
GGGAAGATCG TTGGCCCTGA GCGACCGGCC AACATGGCCT GGGGCGACGA CGGCAAAACG
CTGTACCTCA CCGCCCACAC CGGCCTGTAT AAGATTACTA CCATCAACGG CGGCCGAATG
GCACATCAAA TGAACTAA
|
|---|
| Protein sequence | MRLCIILLLF LPQTLPAQEI RELAWGNPTA VVDLRKPESS QLVKAQWRSL NPSITPAKFN
APGPSATDKF RLYPTGKPIS TFTLEPRFGT PAFNQSPWET VAPTDLETRR GNGLLSHVWY
RTTVTLPQTV GTFAVTGSRV LFELVADDYS EVWINGKLRK SFGARANGVI NGYNARQRVW
LTDNAKPGDT FDLSILVTNG PIADLPDNYV WIRSATLDFY PTKPIPDAWK NLGQVVQIQD
GLKSVIDPAV RIEKVADGFQ FTEGPVWHPD GYLLFSDPNA NVIYKYDPHL GNVSIYMTKT
GYTGYDIGEY HQPGSNGLAI DPAGHLVLCQ HGNRRIIRDE IKGPMTVLSD GYDGRKLNSP
NDLVIKSNGD VYFTDPPYGL PKAFADPRKE TPYSGVYRIR NGKTDLLTTE LGGPNGIAFS
PDEKFLYVSN WDIRDIHNTK TLWRFAVKDD GTLSAGKVFF DMNQTDDDEA LDGIKVDTKG
NIFVSAPGGV WIISPTGQYL GKIVGPERPA NMAWGDDGKT LYLTAHTGLY KITTINGGRM
AHQMN
|
|---|
| |