| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2260 |
|---|
| Symbol | |
|---|
| ID | 8726001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2739482 |
|---|
| End bp | 2740441 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003387080 |
|---|
| Protein GI | 284037150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.46285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.598138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCT CCGTCAGAAT AGCCCCTTAC ACCGTATTTT CAGCGTTGGT TCTTCTGGCG
GCCAGCTTGT CGTTTGTACC GGTTAGCCCG TTGTCTGAAC CGGCGGCACC AACTTTCCCG
GCTGAGCTGA CAACGTTCTC ACCAGGTCCG TCCAATCCGG TTTTTACGGG AACAGGCGCT
GACACCTGGG ATCAGAAGAT TCGGGAGCGA GGGTATATTC TTCACGAAGA CGGGCTCTAC
CACATGTGGT ATACGGGTTA CCGTGACGGG GCAAATCAAA CCCGCTCTTT AGGGTATGCC
ACCTCGCCGG ACGGCTTCAC GTGGACCCGT TACAAAGGCA ATCCAATCCA TGCTACTTCC
TGGGTTGAAG ATGTGTCGGT AAGTAAATCC GGTTCTACTT ACTACATGTT TGCAGAAGGG
GAGAACGATG TGGCTCACCT GCTTACCTCT ACCGACCGAA TCCACTGGAA AGAACAGGGG
CCGCTCGACA TTCGGTACAC GAATAACCAG CCACTGAGTG AAGGGCCTTA CGGTACGCCC
ACAATCTGGC GAGAGAAAGG AGTCTGGTAC CTGTTTTATG AACGGAAGGA TGCGGCCGTT
TGGCTTGCAA CATCCAAAGA CCTGACCGTT TGGACCAATG TGCAGGATGA GCCGGTTCTA
ACCAAAGGCC CGGCCGGGTA CGACCGTTAT GCGGTGGCGA TGAATCAGGT AATTCGCTAT
AATGGAGCGT ATTATGCCTA TTACCATGCA TCGGCTTTTC CCGATTGGCG GGAATGGTCT
ACCAATGTAG CGGTATCGAA AGACCTGATT CACTGGACAA AATACAACGG TAATCCTATC
GTCGGCGGGA ATCGGTCCAG TGGAATTCTG GTGAATGACG GGTCTGGATT TCGACTGTTT
ACCATGCATC CGGCCGTTAG CGTCTTCTTC CCAGTACATA CCGGCAGGAG GCCAAAGTGA
|
|---|
| Protein sequence | MQTSVRIAPY TVFSALVLLA ASLSFVPVSP LSEPAAPTFP AELTTFSPGP SNPVFTGTGA
DTWDQKIRER GYILHEDGLY HMWYTGYRDG ANQTRSLGYA TSPDGFTWTR YKGNPIHATS
WVEDVSVSKS GSTYYMFAEG ENDVAHLLTS TDRIHWKEQG PLDIRYTNNQ PLSEGPYGTP
TIWREKGVWY LFYERKDAAV WLATSKDLTV WTNVQDEPVL TKGPAGYDRY AVAMNQVIRY
NGAYYAYYHA SAFPDWREWS TNVAVSKDLI HWTKYNGNPI VGGNRSSGIL VNDGSGFRLF
TMHPAVSVFF PVHTGRRPK
|
|---|
| |