Gene Slin_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2229 
Symbol 
ID8725967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2699468 
End bp2700793 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAcetyl xylan esterase 
Protein accessionYP_003387049 
Protein GI284037119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0209734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.221922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC AAATCTGCAA TCTATCATCC ATGAAAAAAC TACTACTGCC CGGCCTGCTC 
CTGATTTGGG TTCAGATTGG GCTGGCTCAG CCTGTCGAAC GGCTCGTTAA AGTCCTCGTT
ACGCCCGATC ATGCCGACTG GCTCTATAAA ACCGGCGAAC CGGTCAAATT CAATATTTCA
GTTTACCGGA ACAACGTACT GCTTCGGGGC GCTAAACTTC GGTACGAGAT CGGACCGGAG
AAAATGGAGC CGACCAAAAA GGAAACCGTC ACGCTAAAAG AGGGCACCCT CGCGCTGGAT
GGCGGGACAA TGAAAACCGC CGGTTTCCTG CGCTGCATTG CCACCGTTGA ACTCGACGGA
AAAGAGTACC GGGGGTTAAC GACGGCTGGC TTCGACCCAT TGACCATTAA ACCAACGGTG
ACCTATCCAG CCGACTTTAA GGCCTTCTGG GATAAAGCGA AGGCCGATCT GGCGAAAGTG
CCTATAGATG CCCGGATGAC GCTCCTGCCG GAACGGTGTA CCGAGCTGAC GAACGTTTAT
CAGCTCAACT TGCAGAATAT CAACAACTCG CGCTTTTACG GGATTTTGTG CATTCCAAAA
AAAGAAGGTA AATACCCGGC TATACTTCGG GTTCCGGGCG CTGGTGTTCG TCCCTACGGG
GGTATGATTG CCGAAGCAGA CAAAGGATTT ATTACACTGG AAGTGGGTAT TCATGGCGTT
CCTGTAACCA TGGACCCCGC CGTGTACGAT AACCTGAGCC GAGGGCCGCT GAATGGCTAC
CAGGCGGCCA ATCTGGATGA TAAAGACCGG TATTATTACA AACGGGTTTA TCTGGGTTGT
GTACGGGCGG TAGATTTCCT GGCGAGTATG CCGCAGTATG ACGGTCAGAA TATGGCGGTT
ACGGGCGGAA GTCAGGGCGG AGCCCTCAGT ATCGTTACGG CTGGCCTGGA TTCCAGAATC
AAGTGGTTGG GCGCCTATTA CCCCGCCCTG AGCGATATGA CCGGCTACCT CAACGGACGC
GCCGGTGGCT GGCCGCATCT GTTCGCTGGC GATAACCTGG CCTATAACAA CAAACCCGAC
CGGATCAAAA CCGTCGGTTA TTACGATGTG GTCAATTTTG CACGGCAGGT AAACGTGCCG
GGTTACTACT CGTGGGGGTT CAACGACGAA ACCTGTCCGC CCACGTCCAT GTATTCCGCT
TATAACGTCA TTCCCGGCCC CAAAAACCTG GACACCCTGT TTCTTGATAC CGGCCACTGG
ACCTATCCAG AGCAAACCGA AAAAATGACC AACTGGCTGC TTGGTCAGTT AAAAGGCCAG
AAGTAA
 
Protein sequence
MNEQICNLSS MKKLLLPGLL LIWVQIGLAQ PVERLVKVLV TPDHADWLYK TGEPVKFNIS 
VYRNNVLLRG AKLRYEIGPE KMEPTKKETV TLKEGTLALD GGTMKTAGFL RCIATVELDG
KEYRGLTTAG FDPLTIKPTV TYPADFKAFW DKAKADLAKV PIDARMTLLP ERCTELTNVY
QLNLQNINNS RFYGILCIPK KEGKYPAILR VPGAGVRPYG GMIAEADKGF ITLEVGIHGV
PVTMDPAVYD NLSRGPLNGY QAANLDDKDR YYYKRVYLGC VRAVDFLASM PQYDGQNMAV
TGGSQGGALS IVTAGLDSRI KWLGAYYPAL SDMTGYLNGR AGGWPHLFAG DNLAYNNKPD
RIKTVGYYDV VNFARQVNVP GYYSWGFNDE TCPPTSMYSA YNVIPGPKNL DTLFLDTGHW
TYPEQTEKMT NWLLGQLKGQ K