Gene Slin_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2221 
Symbol 
ID8725959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2691770 
End bp2692663 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content52% 
IMG OID 
ProductSAM dependent methyltransferase 
Protein accessionYP_003387042 
Protein GI284037112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0816781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TTCGGATACT AACGCCCTCA CCCTGGGCAG ACTACGAGCT TATCGACTCG 
GGCAATTTTC AGAAGCTCGA ACGCTTCGGA GCTTACGTGC TGGCACGCCC AGAACCCCAG
GCTATATGGG ATAAATCGCT CACCGATGCT GATTGGGAAC GCCGTGCACA CGCTGTTTTT
CGGCGGGATA GGCAATCACC CGAACGGGGA GACTGGCAAA CTGCGCCCGA CATGCACGAC
CCCTGGTATG TGTCATTTCA ACAGGGCGGG TTAAACCTGA AGTTCAAACT GGCTCTGACA
ACCTTTAAGC ATGTTGGACT TTTTCCCGAA CAGGCCGATA ACTGGTTATA CATTCATGAC
AAAGTAAAAG CGATTTCGGC TACTGTCTCC CGACCTAAAT TCCTGAATCT GTTTGCCTAC
ACGGGTGGGG CTTCCCTGGC CGCCCGGCAA GCCGGTGCTG ATGTTACACA CGTCGACGCC
GTGAAACCAG TCATCAGCTG GGCTCGTGAG AACATGGATC ATAGTGAGTT AGACAACATC
CGCTGGGTAG TTGAAGATGC CGTTAAGTTT GTTCGTCGGG AAGTTCGTCG GGGAAACCGG
TACAACGGCA TTATTCTTGA TCCCCCCGCA TATGGGCGTG GTCCGGATGG CGAGAAATGG
GTACTCGAAG AGCACCTCAA TGACTTGCTT AAGGCCTGTG CCGATCTGCT GGAGCGCGAA
GATTTTTTCT TTATCATAAA TTTGTACTCG CTGGGTTTTT CGTCGCTCAT CCTCGACAAC
CTGATGAATC AGGTCTTTGG CAGCGTACCC AATCCGGAGT GGGGCGAACT GTTTATGCAG
GATAATTACC AGAAGCGGCT CCCATTAGGC GTATTTTACC GATTTGCATC ATGA
 
Protein sequence
MADIRILTPS PWADYELIDS GNFQKLERFG AYVLARPEPQ AIWDKSLTDA DWERRAHAVF 
RRDRQSPERG DWQTAPDMHD PWYVSFQQGG LNLKFKLALT TFKHVGLFPE QADNWLYIHD
KVKAISATVS RPKFLNLFAY TGGASLAARQ AGADVTHVDA VKPVISWARE NMDHSELDNI
RWVVEDAVKF VRREVRRGNR YNGIILDPPA YGRGPDGEKW VLEEHLNDLL KACADLLERE
DFFFIINLYS LGFSSLILDN LMNQVFGSVP NPEWGELFMQ DNYQKRLPLG VFYRFAS