Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2143 |
Symbol | |
ID | 8725881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2599588 |
End bp | 2600397 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Helix-turn-helix, AraC domain protein |
Protein accession | YP_003386970 |
Protein GI | 284037040 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAA TCTTCGAGAA TATTAGACAG CTCTATCAAT TCCGTACTTT CAGCAACGAA CTGGCTGAGT TTGTCGAATT TGTCTCCGAA TCATCAGCAA TCCAGACGTA TCGCCATGTG GCAGATCAGC CATTTACCAT TCGTATGTTC CCCAGTTGGA CACCCACCTT TTACATTAAT CTGGGCCAAC CTTATCACTT AGTCCTGGGG GCTGCCCATC ACTGGATTCA TAAAGACGCG GATGTACTTA TTCTAAGAAA TAACATCGTG GAGCGGCACA ATCTGCCAAC CGATCACATC CTCACCATTA AATTTTATCC GGGGGGACTC GAAGCTATTC TCGGCATCAA CCAAGTTCAG TTTATCGATC AAGTCATCAA ACTGGAAGCG ATTTTACCGC TCTCTCTGCT GCAACGCATA AAGCAACTCC CTCAGTTTGA CCAACGAATT GGCCTAATTG AACACTACTT TTTGGGGCAA TACCAAACCC GTAAAAAAGC TGATTATTAC CGCCAAATAG TCTCCAGCAC CATCGGCACC TTCGATCAGA GTGGGATGCA GCTCAACACA AGTCAACTAG CCGACCGGAT GTTTAATACC TCGAAAACCA TCAATCGGTA TTTCCACCGT GTGGTTGGAA CATCTCCCAA ACAGTACCTT TCGGTGATGC GCGCGCGAAG TGCCTTAACG ACTTTTGTCA ACCAGCCCCA TCGCTTCGAT CCAGTTTCCT TTGGCTATTA CGACCTTAGT CATTTTCACA AGAGCATTCG CCAATTTACG GGCCAGAGCT TAGCCAGTCA ACGACACTGA
|
Protein sequence | MTEIFENIRQ LYQFRTFSNE LAEFVEFVSE SSAIQTYRHV ADQPFTIRMF PSWTPTFYIN LGQPYHLVLG AAHHWIHKDA DVLILRNNIV ERHNLPTDHI LTIKFYPGGL EAILGINQVQ FIDQVIKLEA ILPLSLLQRI KQLPQFDQRI GLIEHYFLGQ YQTRKKADYY RQIVSSTIGT FDQSGMQLNT SQLADRMFNT SKTINRYFHR VVGTSPKQYL SVMRARSALT TFVNQPHRFD PVSFGYYDLS HFHKSIRQFT GQSLASQRH
|
| |