Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2085 |
Symbol | |
ID | 8725823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2515066 |
End bp | 2516652 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003386923 |
Protein GI | 284036993 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.85174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGA GTGAATTTGG TTTGCGAACT AATGACACAC TTCATTACCA ACACAATTAT TACAACCGTT GGGCAAATCA ACTGCGGATA AAACCCATAA CCTCTAATGG TAATTATGTT GGACAATTTA TTGAAACGGC CTCCCATGAG TTTTGCACGC CCCTGGCGGC CATTCAGTCA AGTGCCGACT TAATCGAGCA ACATGTCAAT CGAGAAGCGG CTACCTCGTC AACGCCTGCC ATCAGACGGC ACCTGGCCGT TATTTCGGCC AAACTAACGG CGCTTGACCG CTTACTAAGG GATACGCTGA CGCTGAGCCA AATTGAAGCA GGCAAAACTG AACTGCAACT GGAATGGACA GATTCGGTGT CGTTCATCCG GACCTTACTC GAATCTACCT ACGGCCCTGA GTTAGCTTCC CACCGAGAGA ATTGCCGTCT CTTTAAACAC TCCAATGTGA GACAAGGGAG CGTTCATGAA TTTGTTTTAA AAACTGGGGG TTCAGAGAGA AAGATAATCA AGGTCAGAGA AGTGGCTTGT AACAGCAGAC CCATATTCAT CGAAATAAAC GTATACCTTG CCGCTATGAG CGCTAAATTC CCCGCCACTT ATTCAACTCT CAGCCCCGCT GCCCTGGCTA CTCTACTCGC CCAAACCTAT GACCTGGAAA ATGTGCGATG CGCCTTCCTG GTTCGGGGAG TAGGCGACAC CTATCTGGTT GAATCGGAAC AGGACCGATT CATCCTGCGT ATTTACCGGT CTTCCCATCG AAGTCTGGCC CACGTCCAAG CCGAAGTGGC TATGCTGCTA GCACTCAAGC AGGCAGGCGT ATCGGTGTCT TATCCTATTG TTGATCGCAC AAAAGGTACT ATTCAGACCA TTGACGCCAT TGAGGGACAA CGACAAGCCG TGCTTTTTAG CTATGCTCCT GGCCAGCCGG CTAGCATACT GACGCCTAAT CAACTCCGCT CATTGGGTCG GGAAATGGCG CGCTTTCACC GGGTTTCATC GACCCTTACG CTGCCCGGAG AGCGGTGGGT TTTTGATCTG GATACCACCT TTTTTCACCC TTTAGAACGC TTGCAACCCA CTTTTGGCGC TGATCAGGAA GGATATGACT GGTTGCGAAA CCAAGCTACC TACGTGGTCG AAAAATTGTC ACACGTCAAT ACCGCTGGCT TCATGACCGG CTATTGCCAT TTTGACTTCT TACCCAAAAA CGTTCATTTT GAGGGGGAGT CAGTAACCTT GTTTGACTTT GATTTCATGG GCTACGGCTG GTTGATCAAT GATATTATGT CGTTTTGGCA ACATCTGGCC TTAGCGGTCT ACGCGGGTCG GATGAGCCAG CAAGCTTGTG ATGAAGCTTA TGCTTTTTTT CTAGAGGGCT ATGGTGAGTT CGGTTCAATT AGCGACCAGG AACTGGCCCT AGTTCCTTAC CTATCGCTGG GCTTTTGGCT GTTTTACATG AGCTTCCATA CGACCCATGA CCAATTTTAC AGTTTCAGTC AGCCCGCACA CCGAAACGTA TATATTGGCT TTTTGCGGCA TCTGGTAGCC ATGTATTGGG ACAAGTTGGC CGATTAG
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Protein sequence | MGLSEFGLRT NDTLHYQHNY YNRWANQLRI KPITSNGNYV GQFIETASHE FCTPLAAIQS SADLIEQHVN REAATSSTPA IRRHLAVISA KLTALDRLLR DTLTLSQIEA GKTELQLEWT DSVSFIRTLL ESTYGPELAS HRENCRLFKH SNVRQGSVHE FVLKTGGSER KIIKVREVAC NSRPIFIEIN VYLAAMSAKF PATYSTLSPA ALATLLAQTY DLENVRCAFL VRGVGDTYLV ESEQDRFILR IYRSSHRSLA HVQAEVAMLL ALKQAGVSVS YPIVDRTKGT IQTIDAIEGQ RQAVLFSYAP GQPASILTPN QLRSLGREMA RFHRVSSTLT LPGERWVFDL DTTFFHPLER LQPTFGADQE GYDWLRNQAT YVVEKLSHVN TAGFMTGYCH FDFLPKNVHF EGESVTLFDF DFMGYGWLIN DIMSFWQHLA LAVYAGRMSQ QACDEAYAFF LEGYGEFGSI SDQELALVPY LSLGFWLFYM SFHTTHDQFY SFSQPAHRNV YIGFLRHLVA MYWDKLAD
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