Gene Slin_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2007 
Symbol 
ID8725745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2422609 
End bp2423514 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID 
ProductHPr kinase 
Protein accessionYP_003386851 
Protein GI284036921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.618499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACGTTGCCTT CGGCTTGACA CTTGAAACCG AACTTGATTT CACGGACATT 
TTACAGGAAT CGACGGCAGA AACCGATGTT CAGATAACTG AAACAGTCAT TTATGACCAG
GCCAATCGAC CAACTCGTGT ACACCGTCGT GGTGTACAGG CCCGATTTGG CAGAACAGCA
ACCACGCTGC TCCTGAACTG GCCCGGAATT GCGACCTTTC AGGTTTCCAG CGGCAATAAA
ATAACCTACC AGAACCAGGG TACCGACAAG GGCACCCTGC GCCTATTTCT CCTAAGCGAA
ATTTTTGGCC TTCTGCTCTA CCAGCGGGGG ATCTTTTTGT TACACGGCAG TGCCGTAAAG
GTAGGAACAA CGGCATCAGT ATTCGTGGGC GTACCCGGCG CCGGCAAATC AACGACGGCA
GCCGCCTTCG GCCAGGTTGG GCACACGGTG CTGACAGATG ATCTGGTCGC CATCCAGTTA
ATTAATAACA GGCCATTTGT AATCCCGGCC TTTGCCCAGT ACAAAATCTG GAGAAATACA
GTCGATGGGC TAAAGCTCGA CGAATCAAAA CTGGAGCCAT CCTTTGAAGG AGCTACCAAA
TTTCTGGTGA CGCAGCCTTT AGCCGACTTC CCCAATTCTC CTATTCCCTT ACAGCGCATT
ACCCTGCTGT ATCCGCCTAA GGCCCGTCGG CCAGATGAGC CAATCAAACC CCTGCGGTCA
CCGGTCGAAT TGCTTAAACA TTTTCCATTG CCGGTTCAAC TCCTGACGGG TGATTTTTTA
CAGACACATT TTCGGGATTC ACTGGCGATT GCTCAGTACG CTGCCATTTA TCAACAAAAA
AGGCCCAACG GGTTTGACGC GCTGAACCTT TTTGTGAAAT CGTATTCGGA CAGATACTTA
GCCTAA
 
Protein sequence
MKKYVAFGLT LETELDFTDI LQESTAETDV QITETVIYDQ ANRPTRVHRR GVQARFGRTA 
TTLLLNWPGI ATFQVSSGNK ITYQNQGTDK GTLRLFLLSE IFGLLLYQRG IFLLHGSAVK
VGTTASVFVG VPGAGKSTTA AAFGQVGHTV LTDDLVAIQL INNRPFVIPA FAQYKIWRNT
VDGLKLDESK LEPSFEGATK FLVTQPLADF PNSPIPLQRI TLLYPPKARR PDEPIKPLRS
PVELLKHFPL PVQLLTGDFL QTHFRDSLAI AQYAAIYQQK RPNGFDALNL FVKSYSDRYL
A