Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2007 |
Symbol | |
ID | 8725745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2422609 |
End bp | 2423514 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | HPr kinase |
Protein accession | YP_003386851 |
Protein GI | 284036921 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.618499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT ACGTTGCCTT CGGCTTGACA CTTGAAACCG AACTTGATTT CACGGACATT TTACAGGAAT CGACGGCAGA AACCGATGTT CAGATAACTG AAACAGTCAT TTATGACCAG GCCAATCGAC CAACTCGTGT ACACCGTCGT GGTGTACAGG CCCGATTTGG CAGAACAGCA ACCACGCTGC TCCTGAACTG GCCCGGAATT GCGACCTTTC AGGTTTCCAG CGGCAATAAA ATAACCTACC AGAACCAGGG TACCGACAAG GGCACCCTGC GCCTATTTCT CCTAAGCGAA ATTTTTGGCC TTCTGCTCTA CCAGCGGGGG ATCTTTTTGT TACACGGCAG TGCCGTAAAG GTAGGAACAA CGGCATCAGT ATTCGTGGGC GTACCCGGCG CCGGCAAATC AACGACGGCA GCCGCCTTCG GCCAGGTTGG GCACACGGTG CTGACAGATG ATCTGGTCGC CATCCAGTTA ATTAATAACA GGCCATTTGT AATCCCGGCC TTTGCCCAGT ACAAAATCTG GAGAAATACA GTCGATGGGC TAAAGCTCGA CGAATCAAAA CTGGAGCCAT CCTTTGAAGG AGCTACCAAA TTTCTGGTGA CGCAGCCTTT AGCCGACTTC CCCAATTCTC CTATTCCCTT ACAGCGCATT ACCCTGCTGT ATCCGCCTAA GGCCCGTCGG CCAGATGAGC CAATCAAACC CCTGCGGTCA CCGGTCGAAT TGCTTAAACA TTTTCCATTG CCGGTTCAAC TCCTGACGGG TGATTTTTTA CAGACACATT TTCGGGATTC ACTGGCGATT GCTCAGTACG CTGCCATTTA TCAACAAAAA AGGCCCAACG GGTTTGACGC GCTGAACCTT TTTGTGAAAT CGTATTCGGA CAGATACTTA GCCTAA
|
Protein sequence | MKKYVAFGLT LETELDFTDI LQESTAETDV QITETVIYDQ ANRPTRVHRR GVQARFGRTA TTLLLNWPGI ATFQVSSGNK ITYQNQGTDK GTLRLFLLSE IFGLLLYQRG IFLLHGSAVK VGTTASVFVG VPGAGKSTTA AAFGQVGHTV LTDDLVAIQL INNRPFVIPA FAQYKIWRNT VDGLKLDESK LEPSFEGATK FLVTQPLADF PNSPIPLQRI TLLYPPKARR PDEPIKPLRS PVELLKHFPL PVQLLTGDFL QTHFRDSLAI AQYAAIYQQK RPNGFDALNL FVKSYSDRYL A
|
| |