Gene Slin_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1935 
Symbol 
ID8725672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2340618 
End bp2341682 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content59% 
IMG OID 
Productprotein of unknown function DUF1611 
Protein accessionYP_003386779 
Protein GI284036849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.614904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC AAGCTATACT GCTTACAGAC GGCCTTCTCA CAACAACCGA TGCCAAAACG 
GCCCACGGCC TTATCCGGGG CACGGAGCGG TATACAGTTG TGGGGGTGGT CGATGCGCCA
ACGGCCGGAC AGGATGCGGG CACTGTACTC GACGGCACCA CCCGCAACAT ACCCATTTAT
GCGTCGGTTA GTGAAGCACT CGCCCATCTG CCAGCCGTTT CCTACGCCAT CGTGGCGGTG
GCAACCAACG GGGGCGTTTT ACCCACAAAC ATGCTGGCCG ACATCAAACT CTGTCTTCAG
CAGGGCCTTT CGGTGGTTAA CGGACTCCAC GAATTCCTCA ACGATAAGCC GGATCTGGTG
GCGCTGGCGC AGCAGTCAGG CGCTCAATTA ATCGACGTTC GGCGGCCAAA ACCCCGACAG
GAACTGCATT TCTGGACGGG TGAGATCAAC CAGGTAACGG CTCCCATTAT TGCCATTATG
GGAACAGACT GTGCGCTGGG AAAACGCACG ACGACCCGGT TGATTCGGGA AGCCTGCGAA
CGGCAGGCGA TCAATGCACA GATGATTTAC ACCGGGCAAA CCGGCTGGCT ACAGGGCGTC
CGGTACGGCT TCATCTTCGA CTCGACCCTC AACGATTTCG TGTCGGGCGA GCTGGAACAC
GCGCTGGTAT CGTGCTGGCG CGAAACGGGT GCCGATGTGC TGCTCATCGA GGGGCAGGCT
TCCCTGCGTA ACCCCAGCGG CCCCTGCGGC TCAGAGTTTC TGGTTTCCGG CAATGCGCGG
CATGTGGTGC TGGTTCATGC GCCCAAACGT ACGTATTACG ACCATTTACC GGCCTGGGGA
GCCATCCCGT CGGTCGAGTC GGAAATTGCC CTGATCGGGT GTTACGGGGC AACCGTAATT
GCCCTCGCCC TGAACACGGA AGGGTGCTCA CGGGAGGAAG CCTTCGCCTT TCAGAGGGAG
TACACCGAGC GGCTGGGGAT TCCGGTGCTG CTGCCGCTGG AAGAGGGTGT CGACCCGATT
TTACCCACTA TTCACGCCCT AACGTCCATG TCCCATGCGC ATTAA
 
Protein sequence
MTNQAILLTD GLLTTTDAKT AHGLIRGTER YTVVGVVDAP TAGQDAGTVL DGTTRNIPIY 
ASVSEALAHL PAVSYAIVAV ATNGGVLPTN MLADIKLCLQ QGLSVVNGLH EFLNDKPDLV
ALAQQSGAQL IDVRRPKPRQ ELHFWTGEIN QVTAPIIAIM GTDCALGKRT TTRLIREACE
RQAINAQMIY TGQTGWLQGV RYGFIFDSTL NDFVSGELEH ALVSCWRETG ADVLLIEGQA
SLRNPSGPCG SEFLVSGNAR HVVLVHAPKR TYYDHLPAWG AIPSVESEIA LIGCYGATVI
ALALNTEGCS REEAFAFQRE YTERLGIPVL LPLEEGVDPI LPTIHALTSM SHAH