| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1887 |
|---|
| Symbol | |
|---|
| ID | 8725624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2281358 |
|---|
| End bp | 2282434 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Kelch repeat-containing protein |
|---|
| Protein accession | YP_003386731 |
|---|
| Protein GI | 284036801 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.445604 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATT TACCATTCCG ATTTCATTCG GCTACCGACT CCCAGCCGCA ATCTGTACCC
CAAGAGGCTC TGCTCTCTCC CGTAACGAAG ACAGGTAAAA AACAGCAACG GATAAATTGG
GTGCTGGGTG CTCTTTCTAT CGGCTGGGCA GGACTGCTGA TCGGCTGTAG CAGTTCCACC
ACGGTGTCGA CCCTGGGTGA CTGGACAAAA AGATCCGCAT TTGAAGGCGT GGGCCGTTCA
GGTGCATCTA GTTTTGTCAT TAACAATATT GCTTACCTGG GTACCGGCCT TGATGCCAGT
AACCAGCGGC TTCAGGATTT CTGGGCTTAT GACCCGGCCA AAAATGCCTG GACACAAAAA
GCCAACTATG GTGGTGTAGC CCGCTACTCA GGCGTAGGCT TTGCTGTCGG CAACAAAGGG
TATATCGGTA CCGGTATCAA TGTCAACAGC GACAAGCTGA AGGATTTCTG GAGCTACGAT
CCAACCACCA ACATATGGAC CAAGGTTTCG GATTTCGGCG GAACAGCCCG GTACGGTTCG
CTGGCTTTCG GAATTGGCAA CAAAGGCTAT GTGGCCACCG GCAACGACGG TAACTACCTC
AAAGATATGT GGGCGTTTGA CCCTACGGCC AATGCCTGGA CCAAGGTAGC TAGCTACGGT
GGTGAAAAAC GCATTGGCGG TATCGCTTTT GTGATTGATG GCAAAGCCTA TGCAGGTACC
GGAAACAACA ATGGTATTGC CCAGCGGGAC TGGTATGTGT ATGATCCGGC CACGGATGTA
TGGACGCAGA AGCTCGACTT CCTGACCGAT CAGGCCGTTC AGCGCAGCTA TGCTGTTGGG
TTCGCCATCA ATGGCAAAGG TTATGTGACA CTTGGCGATA ACGTATCCGT TTGGCAGTAC
AATCCGGCCG ATGATACCTG GTCGCAACTT GGTTCTTTTG AAGGATCTCC CCGCCAGAAC
GCGGTAGGCT TTGCAATCGG AAACAAAGGG TACGTTACCA CGGGTAGTTC CAGCGGAACA
AGCCGTTTTG ACGATCTGTG GGATTTCGAT CCAGCCGTTG AGCAGGTTAT TAACTAA
|
|---|
| Protein sequence | MIHLPFRFHS ATDSQPQSVP QEALLSPVTK TGKKQQRINW VLGALSIGWA GLLIGCSSST
TVSTLGDWTK RSAFEGVGRS GASSFVINNI AYLGTGLDAS NQRLQDFWAY DPAKNAWTQK
ANYGGVARYS GVGFAVGNKG YIGTGINVNS DKLKDFWSYD PTTNIWTKVS DFGGTARYGS
LAFGIGNKGY VATGNDGNYL KDMWAFDPTA NAWTKVASYG GEKRIGGIAF VIDGKAYAGT
GNNNGIAQRD WYVYDPATDV WTQKLDFLTD QAVQRSYAVG FAINGKGYVT LGDNVSVWQY
NPADDTWSQL GSFEGSPRQN AVGFAIGNKG YVTTGSSSGT SRFDDLWDFD PAVEQVIN
|
|---|
| |