| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1878 |
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| Symbol | |
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| ID | 8725615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2268667 |
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| End bp | 2271144 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003386722 |
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| Protein GI | 284036792 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTAA ATCGTTGGTT GTGTCTGTCT CTCTTTTTTT CATCGCCAGT ATGGGCGCAG
TCGAATCTTA AACTCTGGTA TACCAAACCC GCTGCGGTCT GGACAGAGGC TCTACCCGTT
GGCAATGGGC GGATTGGGGC CATGATTTTT GGAAAAGTAG AGGATGAACT CATTCAACTT
AATGAAAGTA CCCTCTGGTC GGGTGGGCCG GTTTCCGGGA ATGTTAACCC CGAATCGCCG
TCGTACCTGC CCCAGGTTCG AGAGGCACTC AACCGGGAAG ATTACAAGCA GGCCGTCACG
CTGGTGAAAA AGATGCAGGG GCTATACACC CAATCGTACA TGCCGCTGGG CGATTTGTCC
CTGAAACAAA ACCTAAACGG CGCTACGCCA ACCGGTTATT ATCGGGACCT GGATATTCAG
AAAGCCCTCG CTACAACCCG CTTTACGGCC AATGGTGTTA CGTACAAGCG TGAGATGTTT
ACCTCCGCCC CCGATGGTGT GATGGTCATT CGGCTGACGG CCAGCAAACC CGGTCAGCTC
AGCTTCGATG CCTCGACCAG TAGTCAGCTT CGGGCCGAAA ACATGCGTGG AAGTAATGGC
GATCTGGTTA TGAAAGGCAA AGCACCCACT CAGGTCGACC CGAATTATTA TAACCCCAAA
GACCGTGAGC ACGTTATCTA TGAAGATGCC ACCGGCTGTA AAGGAATGCG GTTTCAACTG
CGGCTAAAAG CACTGAACAA AGGCGGCACC GTCCAGACCG ATAAAGAGGG TATTCACGTC
CGTAATGCGT CGGAAGTCTT ATTATTCGTA GCGGCTACCA CCAGTTTCAA CGGCTACGAC
AAATGCCCGG ATAAAGACGG GAAAGACGAA AATAAACTGG CCGAAGAACT GATTCGCAAA
GCCACCGCCA CCAGTTACCA GGCGCTCCTG AACCGGCACA CCGCTGATTA TCAATCGTAT
TTTAACCGGT TTTCGTTTCA GATCACCGAT ACTACCAGCG TTAATAAAAA TGCCGCTTTA
CCCTCCGACG AACGGCTGGA GATGTACAGC AAGGGCGTTT ATGACCCCGG TATCGAAACG
CTCTACTGCC AGTATGGCCG TTATCTGTTG ATTTCCAGTT CGCGCGTGAC CAATGTACCC
GCTAACCTTC AGGGCATCTG GAACAAAGAG TTGCGGGCAC CATGGAGTTC GAACTATACC
ATCAACATCA ATACTCAGAT GAACTACTGG CCCGTAGAGG TAACAAACCT CTCGGAGTTG
CACCGGCCTC TTCTGAGTTT TATTGGTGAA CTGGCCAAAA CGGGAGCCGT CACGGCCAAA
GAGTTTTATA ACATGAACGG CTGGGTGGTG CACCACAACA CCGACATCTG GGCCATTTCA
AACCCTGTAG GCGACAAAGG ACAGGGTGAC CCAAAATGGG CTAACTGGAA CCAGGGAGCC
GGTTGGCTGA GCCAGCACCT CTGGGAACAT TACCGCTTTA CGGGCGACAA AAAATTCCTG
CGTGAGTCAG CTTACCCCAT CATGAAAGGA GCCGCCGAGT TTTACCTCGA CTGGCTGGTA
GCCGACAAAG ACGGTTACCT GGTGGTGTCG CCGTCGGTAT CGCCGGAGAA CGATTTTATC
GACGCCAAAG GGCAGCCCGC GTCGATTTCC GTGGCGACAA CCATGGATAT GTCCATTATG
TGGGATTTAT TCACCAACCT GATCGACGCA TCGACGGTTC TAAACATTGA GCCGGATTTT
CGAAAAATGC TGATCGAGAA ACGAAGCAAA TTTTATCCAC TACACATCGG TCATAAAGGA
AACCTGCAGG AGTGGAGCAA GGACTTTGAG GATGTCGATC CGCAACACCG GCACGTATCG
CACTTGTTCG GCTTGCACCC CGGTCGGCAG ATTTCGCCCA TCAGTACACC CGAGTTTGCG
GCTGCGGCAA AAAGAACACT CGAACTGCGG GGCGATGCCG GAACGGGCTG GAGCCGGGCG
TGGAAAGTGA ACTTCTGGGC CAGACTGCTC GACGGTAATC ATGCCTATAA GCTCCTGCGT
GAACTTTTGC GCTACACCAG CCAGACGAAC ACCAACTACA GCAGCCAGGG CGGGGGCGGT
ACCTACCCGA ATTTCTTCGA TGCCCACCCG CCGTTTCAGA TCGACGGTAA TTTTGGCGGT
ACGGCGGGCA TGGCAGAGAT GCTGGTGCAG AGCCACCTGG ATGCCATTCA TCTGCTGGCC
GCGTTGCCGG ATGCCTGGCG GGATGGACGG GTTTCAGGCC TGCGGGCACG GGGCGGATTT
GAACTGGCCA TGCAGTGGAA GAACCGCCGA CTAACGACCG CAACCGTCAA ATCACTGGAT
GGCGAACCCT GTACCCTCCG AACAAGTGAG CCGATTCGCA TAAAAGGTGT CAAAGTCGAA
TCCAAAGCAA CCAATTTAGG ATATGTTACA ACGTTTAATA CACAAAAGGG TGCTGTGTAT
GAACTAACCG GCATGTAA
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| Protein sequence | MKLNRWLCLS LFFSSPVWAQ SNLKLWYTKP AAVWTEALPV GNGRIGAMIF GKVEDELIQL
NESTLWSGGP VSGNVNPESP SYLPQVREAL NREDYKQAVT LVKKMQGLYT QSYMPLGDLS
LKQNLNGATP TGYYRDLDIQ KALATTRFTA NGVTYKREMF TSAPDGVMVI RLTASKPGQL
SFDASTSSQL RAENMRGSNG DLVMKGKAPT QVDPNYYNPK DREHVIYEDA TGCKGMRFQL
RLKALNKGGT VQTDKEGIHV RNASEVLLFV AATTSFNGYD KCPDKDGKDE NKLAEELIRK
ATATSYQALL NRHTADYQSY FNRFSFQITD TTSVNKNAAL PSDERLEMYS KGVYDPGIET
LYCQYGRYLL ISSSRVTNVP ANLQGIWNKE LRAPWSSNYT ININTQMNYW PVEVTNLSEL
HRPLLSFIGE LAKTGAVTAK EFYNMNGWVV HHNTDIWAIS NPVGDKGQGD PKWANWNQGA
GWLSQHLWEH YRFTGDKKFL RESAYPIMKG AAEFYLDWLV ADKDGYLVVS PSVSPENDFI
DAKGQPASIS VATTMDMSIM WDLFTNLIDA STVLNIEPDF RKMLIEKRSK FYPLHIGHKG
NLQEWSKDFE DVDPQHRHVS HLFGLHPGRQ ISPISTPEFA AAAKRTLELR GDAGTGWSRA
WKVNFWARLL DGNHAYKLLR ELLRYTSQTN TNYSSQGGGG TYPNFFDAHP PFQIDGNFGG
TAGMAEMLVQ SHLDAIHLLA ALPDAWRDGR VSGLRARGGF ELAMQWKNRR LTTATVKSLD
GEPCTLRTSE PIRIKGVKVE SKATNLGYVT TFNTQKGAVY ELTGM
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