Gene Slin_1797 details

Gene Information

• Locus tag: Slin_1797
• ID: 8725534
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 2169577
• End bp: 2172939
• Gene Length: 3363 bp
• Protein Length: 1120 aa
• Translation table: 11
• GC content: 53%
• Product: Exodeoxyribonuclease V
• Protein accession: YP_003386641
• Protein GI: 284036711

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00119316
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.701381
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTCAAAA TATACAGTTC TTCGGCTGGG TCGGGGAAAA CTTATACGCT GACGAAAGAG 
TACCTGAAGC TGGCGTTGCG GCCGGGTGAA AAGGACGACT ATTTTCGCCG GATTCTGGCC 
GTGACGTTCA CCAACGCGGC TGCCAACGAG ATGAAGAACC GGATTCTGAA AAACCTGTCG 
GAGATGGCAG GTAAAAAAGA ATCCCCTCTG CTCAATGAAC TGGTTACGGA ACTGTACGAC 
ACCCCGCCGG GTAGCGATTT GTTTGAGGAC AAGAAAACTG AACTGTGCAG CCGGGCCTCG 
TCTGTTTTCA GAACAATTCT GCACCGCTAT GCCGATTTCA GCGTAACCAC CATTGATTCC 
TTCACACAGC GGGTGGTGAT GGCCTTTACG GATGAGTTAG GATTGCCCTA TTCGTTCGAT 
GTCGAAATGG ACACCGACGA AGTGCTGGAA CTGGCCATCG ACAACCTCAT TGAGAAGGCC 
GGTACCGATG AGATGGAAGA AATTACGACC ATCCTGAGCG AGTACTACAC CCACACGGCC 
GCTGAAGGCA AAAGCTGGAA CCAACTGCCA GAATTGCTGA AAGAATTTGG CCGAAACCTC 
ACCTCCGATC AGTTTTACGA AGCCGTCAAT GCGGCCCAGA AATTATCGCC GGGGGCGTTG 
CGTGCCATTC GGGCTCAGTT ACTGAACCAT AACCAGCAGA TTGAAACGGA CATTATCGGG 
CAGGGGCAAC GCGCCTGGAA ACTGATTACT GATGCGGGGC TGGATGAAAA AGATTTCAGT 
TACGGAGCCA GCGGTGTAGG GGGCTTTTTA AAAGCAATTG CCGAAGGAAA CGCGCACAAA 
GATGCCGGTA CGCGCGTCAG CAACGCGTTA ACGAATAATG AGTGGTACAC CAAAAAGACA 
CCCCTTCCCG TGCAGGCCAT GATCGACAAT ATGGCCGCAG AACTAGGTGC GTGTATCTCA 
GAAATACTTC GTATTCGGGA GGAGAGTAAC CATCAGGTAA CCCTGTTCGA TTGCCTGCTG 
CCCCATTTGC AGAAACTGGC TTTGCTGAAG CAAATGCGCC TGGAGTTCGA TGATCTGCTG 
CGAAAAGACG GCCGGGTGCA CATCTCCGAA TTCAATAAAA AGATTCTGAA CATTGTGGCG 
TCGGAACCGG TGCCGTTCCT CTACGAACGA CTAGGTACGA AATACAACCA CATCCTGATT 
GATGAGTTTC AGGATACGTC GCGGCTGCAA TTTGCCAACC TGTTGCCGCT CATCGAGAAC 
TCCCTGGGTG CCGACCATTT CAATCTGGCC GTGGGCGACG GGAAACAGGC CATTTACCGC 
TTCCGGGGGG GCGATATGGA CCAGATCGTT GCCCTGCACC GCAAAGACCT CGACAGCCTG 
AAACAGGCGC ATAACCCCGG TTCGTGGACC GCCGACCGCA TCGATATGCT CGATGGGCAT 
CTGAAAGACG AATTGCTCGA TACCAACTGG CGAAGTGCCG AACCCATCGT TCGCTTCAAC 
AACGATTTTT TTGAGTTCAC CGCCCGCAAG TTTGAAAGCC AGCACCCGAA ACTGACCGAT 
GTATTCGACA GTCAGAAGTT GTTTCACCAG AAAGCGCAGC CTAAGGCTAA CCTAGCCGGG 
CATGTGCAGA TCGACTTCGT TGCCAAAGAC GATGCGACGG ATAAAGACCT GACCGCTCAG 
ATGCTCGAAA AAGCGATGGA GCACCTGAAT AAAGCCCTGA ACGACGGGTA TAAATACGGT 
GACATCGCTA TCCTGTGTCG AAAAAAATCC CACGCAAAAG CACTCGCCAA CGAGCTAAAT 
GCCCGACGGA TACCGCTCGT GTCGGCCGAT TCGCTGTCGC TGGAGTTTTC CGATCCGGTC 
AAGTGGCTGG TAACGCTCAT GCAGCTGCTG CAGCGGCCCG ACCAGAAACT GCTTCGTTAC 
GAATTGCTGT ATCTGTTTCA TCGGGTAGTG CAGGATATTT TTCCGGACAA TACCCTCACC 
ACCAAACTTC GATCCGTTGC GGAGAGCGAT ATCGACGCCC TCTACGCTTA CCTGGCCGAA 
GAAGGTTACC CCCTCGACCC GTATGCGCTC GGGCAACTCA ATCCGTACGA GCTGGCCGAG 
CGATTGACCG CTCAATTCGG TCTGTTCAAT CAGGCGGAGC ATAACCCGTT CCTCTTTCGG 
TTCCTCGACG AAGTACTGGC GTTTAATCAG AAGCGGAGCG GTCACCTGAG CGACTTTCTC 
TTGTATTGGG AAGGCGTTCG GCAGAAGATT TCGGTTGAGG GCAACGCCCG CAATGCGGTG 
AGTATACAAA CCGTTCACAA ATCGAAAGGA CTTGAGTTCC CGGTGGTGAT CATTCCCTTC 
GCCAACTGGC GGGTGGAGCC CATTAACGAC AGCACCATCT GGCTCGATCT GAGCAGTATT 
CGGAGCGATA TGCTGACGCA CGAAAATAGC ACCGGGGAAC TGACCCGACT ACTATCGGCA 
CCTGCCAATA CGACCAGTAA ACTGCGGGGT GCTCCGGCTG TAGTAGCGGC TCAGTACGAA 
GAGGAGCTGA CGCGGACGTT TCTGGAAAAT ATGAATATGC TCTACGTGGC TTTCACCCGC 
CCAACGGATC GGTTGTACGT CATTAGTGAA GCAAAGGATT TCAGCAAAGG CCAGCAAAAC 
ACCATCAGCC ATTGGTTGCA TGCGTTTCTG CGCGATAGCG AGGTGGCCCG TAATTGCGGC 
TGTGCCTGGC AGGAAGGCGT ATTTAGTTAC CAGATCAGCC TTTGCGCCGA ATATTTCCCG 
CATCACAAAG CTGATGAGTC CCTGGATGAA ATCGTGCTGG ACGAAATCGT GAGCGGGCAT 
CGGGGGCAGG ACTTACAACT TCGCCGTCAG GCCGACAGGA TGTTCGATGT TGCCACGTTT 
GAGCGCACCC GCGAACGTGA TCGTAAGCTT TGCGCGGCCC TCAGTCTGAT CAGGGGTTCC 
GAAAGCATCG ACAAAGTACT TCGTCAACTC GTTAGCGAGG GGCTTGTCCG GCAGGTAGAA 
TGTGACGAAT TAAAGCAAAG TCTGCTGGGC ATTGTTTCGC ATCCGGCTTT ATCAGCCCTG 
TTCGATTCTA CCTTGCGGAT CGATACAGAT CGAAGTATCC TGAGTAATAA GCGGGTACAC 
GGTGCCCCGC ACCGGGTGGT GCATTTTCCG GATGGGCACA TCGTGCTGGT GCAATATGAG 
TCGAAAGCCC TTTCGCCGGA AGCAGAGGCT GTACCTGCAT TGGAACCAGA ATCGGCAAAA 
ACGTACTCGC CAACGGACAC CCTGAAGTAC TTTACTCGTT TGTACCGGGA TATGGGGTTT 
GCGGAAGTGG AAGGCCGGTT GGTGTATCTG GCTGACGAGC CCGATGTAGT TAATGTAGTG 
TAA 

 

Protein sequence

MFKIYSSSAG SGKTYTLTKE YLKLALRPGE KDDYFRRILA VTFTNAAANE MKNRILKNLS 
EMAGKKESPL LNELVTELYD TPPGSDLFED KKTELCSRAS SVFRTILHRY ADFSVTTIDS 
FTQRVVMAFT DELGLPYSFD VEMDTDEVLE LAIDNLIEKA GTDEMEEITT ILSEYYTHTA 
AEGKSWNQLP ELLKEFGRNL TSDQFYEAVN AAQKLSPGAL RAIRAQLLNH NQQIETDIIG 
QGQRAWKLIT DAGLDEKDFS YGASGVGGFL KAIAEGNAHK DAGTRVSNAL TNNEWYTKKT 
PLPVQAMIDN MAAELGACIS EILRIREESN HQVTLFDCLL PHLQKLALLK QMRLEFDDLL 
RKDGRVHISE FNKKILNIVA SEPVPFLYER LGTKYNHILI DEFQDTSRLQ FANLLPLIEN 
SLGADHFNLA VGDGKQAIYR FRGGDMDQIV ALHRKDLDSL KQAHNPGSWT ADRIDMLDGH 
LKDELLDTNW RSAEPIVRFN NDFFEFTARK FESQHPKLTD VFDSQKLFHQ KAQPKANLAG 
HVQIDFVAKD DATDKDLTAQ MLEKAMEHLN KALNDGYKYG DIAILCRKKS HAKALANELN 
ARRIPLVSAD SLSLEFSDPV KWLVTLMQLL QRPDQKLLRY ELLYLFHRVV QDIFPDNTLT 
TKLRSVAESD IDALYAYLAE EGYPLDPYAL GQLNPYELAE RLTAQFGLFN QAEHNPFLFR 
FLDEVLAFNQ KRSGHLSDFL LYWEGVRQKI SVEGNARNAV SIQTVHKSKG LEFPVVIIPF 
ANWRVEPIND STIWLDLSSI RSDMLTHENS TGELTRLLSA PANTTSKLRG APAVVAAQYE 
EELTRTFLEN MNMLYVAFTR PTDRLYVISE AKDFSKGQQN TISHWLHAFL RDSEVARNCG 
CAWQEGVFSY QISLCAEYFP HHKADESLDE IVLDEIVSGH RGQDLQLRRQ ADRMFDVATF 
ERTRERDRKL CAALSLIRGS ESIDKVLRQL VSEGLVRQVE CDELKQSLLG IVSHPALSAL 
FDSTLRIDTD RSILSNKRVH GAPHRVVHFP DGHIVLVQYE SKALSPEAEA VPALEPESAK 
TYSPTDTLKY FTRLYRDMGF AEVEGRLVYL ADEPDVVNVV