Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1781 |
Symbol | |
ID | 8725518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2152898 |
End bp | 2154874 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | OmpA/MotB domain protein |
Protein accession | YP_003386625 |
Protein GI | 284036695 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.973049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA TCGTTGCAGA CACACAAGTT CCTGAATATC CCCTAAAGGG CTTTCGCCGT TGGCACCGGG GCCAAAAAGT AAAGCAGTTA GCGTTGATTG CTTTACTTTT TGCCTCCTGC CCTCCTCTCC TCGCTCAGTC GGCCAAGGCT AAGGAATTAT ACGCCCAGGC CATCAAACTC TTTGGGGAGC GCAAGGCCCG AGAAGCCATT CCATTTATGG AACAGGCCAT TAAACAGGAC CCCGATTTTA CGGATGCCTA TATTAAACTG GGGCAACTGT ATGAGTTTAC CCGGCAGTAT GAACCGGCGC TTTCGGCCTA TCGAAACGTC ATAAAACTTC AGCCCGATAG TCCGGCTTCC GGCGCGGCCT ACCAATCGCT GAGCAATACA CTCCTGCGGT TGGGCCGCTA CAGTGAGGCA CTTCCGTTTC TGGAAAAGTA CCAAACACTT TTTGCGCCCC AGTCGGCGCA GGGAAAACGG ATTACTCACC AGTTAGAAAC CGCCCGTTTT GGCCTGGAGG CCATGCAGCA CCCGCAGGCC GTTGATCCCA AGCCGCTGTC GTCCGTGCTG CAAACGACAC CCTCTCAGTA TTTCCCGGTC CTCACAGCCG ACGAACAAAC CCTCGTTTTC ACAGCTCTCA AGCCCGAAGG CGACGAAGAC CTTATGACAG CTACTTTCAA CGGAGAAACC TGGTCTCCCC CGGTGTCGCT GGCAGCGAGC ATCAACACTC CCGAAAATGA AGGCACGGCC AGCCTGTCAG CCGATGGGCG GACGCTGGTG TTTACGGCCT GTCAGGGCCG GAAAGGGTTC GGAAGCTGCG ATTTGTACGT AAGCCGAAAA ACGGGCAACG ACTGGTCAAG TCCCGACAAT CTGGGGCCAG CCATCAACAC CCGCTATTAC GAATCGCAGC CCGCTTTATC GGCCGACGGC CGACAATTGT ATTTCGTTTC CGACCGGCCG GGGGGAAAGG GTCGGCGAGA CATATGGCGT AGCGCCCTGG GCGCAGATGG CAACTGGACT GAGCCGGTCA ACCTGGGTGA GCCGGTCAAT ACCAGTGCCA ACGAGGCATC GCCCTTCCTT CACGCCAATG GACAAAGTTT ATTTTTCGCA TCAGAAGGCC ATATTGGTCT TGGAGGTTAC GATCTATTTG TGGCCGACAA TAGTCCTTCG GGCTGGTCAG CACCTACGAA CTTAGGTTAT CCGATCAACA CATCTGAAGA TCAGGCATCA CTTTTTGTAA CCGCCAATGG TACCCGGGCT TATTATTCGT TTGAAGAACA GAAAGACGGC ATTTCACAGA AGTCACGGCT TTACACCTTC GATCTGCCCG AATCGTTGCG GGAGCGTGTG CGGCCCGTAA GTTTTTTGAA GGGAACGGTT GCCGATGCCA AAACGAAGAA ACCACTGGCC GCTACCGTCG AGTTGATCGA TCTGAAAACC AATCAAATCG TTTCGCAGGT AAAGGCCGAC GCCCAAACGG GGCAGTATAC AGCGGTCTTA CCCAGCGGGG GCGAATATGC TCTTTATGTA AGCGTGCCAG GGTATCTGTT TAAGAGTCTG TCCTTCGACT TTACCCAGAA GACCAAAGGC GAAGGCCTGA CACTGAGCGT ACCCCTGGAA CCCGTAAGCA CAGGAGCATC GGCCAATGAA ACCCTGAACA ATCTGTTTTT TGAATCCGGG CGGTATGACC TGGCCGAAAA ATCGCGCACC GAACTGGACC GTCTTTCCGT ATTTATGCAG GCCAACCCAA CGGTAGCTGT TGAAATATCG GGCCATACCG ACGACAAGGG TGATGCAGCC GCCAACCTGG CCTTATCGCA GAAACGAGCG CAGGCCGTAG TCACATACCT GACGAAAGCA GGCATACAGC CGAGCCGGAT AAAAGCAGTT GGTTACGGCA AAGCCCGCCC GCTGGTACCC AATACCACCG ATGAAAACCG GCGGCTCAAC CGCCGGATTG ACTGGAGAGT GCTGTAA
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Protein sequence | MANIVADTQV PEYPLKGFRR WHRGQKVKQL ALIALLFASC PPLLAQSAKA KELYAQAIKL FGERKAREAI PFMEQAIKQD PDFTDAYIKL GQLYEFTRQY EPALSAYRNV IKLQPDSPAS GAAYQSLSNT LLRLGRYSEA LPFLEKYQTL FAPQSAQGKR ITHQLETARF GLEAMQHPQA VDPKPLSSVL QTTPSQYFPV LTADEQTLVF TALKPEGDED LMTATFNGET WSPPVSLAAS INTPENEGTA SLSADGRTLV FTACQGRKGF GSCDLYVSRK TGNDWSSPDN LGPAINTRYY ESQPALSADG RQLYFVSDRP GGKGRRDIWR SALGADGNWT EPVNLGEPVN TSANEASPFL HANGQSLFFA SEGHIGLGGY DLFVADNSPS GWSAPTNLGY PINTSEDQAS LFVTANGTRA YYSFEEQKDG ISQKSRLYTF DLPESLRERV RPVSFLKGTV ADAKTKKPLA ATVELIDLKT NQIVSQVKAD AQTGQYTAVL PSGGEYALYV SVPGYLFKSL SFDFTQKTKG EGLTLSVPLE PVSTGASANE TLNNLFFESG RYDLAEKSRT ELDRLSVFMQ ANPTVAVEIS GHTDDKGDAA ANLALSQKRA QAVVTYLTKA GIQPSRIKAV GYGKARPLVP NTTDENRRLN RRIDWRVL
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