Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1744 |
Symbol | |
ID | 8725481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2099055 |
End bp | 2099813 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_003386588 |
Protein GI | 284036658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTACT TTCTTCACCT GGCATATAAG GGCACCAAGT ACCACGGCTG GCAGCGGCAA CCCAACGGGC TGAGCGTTCA GGAAGTTCTC GAAACGGCTT TATCAACGGT ATTACGCCAG CCTATCGCAA TCGTTGGTAG TGGCCGGACC GATGCGGGCG TACATGCCGG GCAGCAATTT GCTCATTTCG ACACCGATGT CGCCCTGCCA ACACAACTGC TTCGGTCGCT CAACAGCATG ATTCCGCCCG ATATTGCCGT GTATGAGTGC TTCCCGGTTC GCCCCGACGA TCATGCCCGC TTTACGGCCC AATCCCGCTA TTACCAGTAT CAGATCAGTC GCCGGAAAGA CCCTTTTCGG GAAGGACTTG TGTATGTATT TACCCTGCCC CTGAACGTCG AACTGATGAA CGAAGCCGCC AGCCGACTAC TGCACCATAT TGACTTTGAG AGTTTCAGTA AAGTCAAAAC CGACGTAAAA ACGTTTAACT GCCAGATTGA ATGGGCGTAC TGGGCGCAAC AACCCAACGG CGATCTGGTC TTTCATATCA AGGCCAATCG GTTTCTGCAT GGCATGGTTC GGGCCATTGT GGGCACGCTG CTGGCGGTAG GGCAGGAGCG GCTTAGTGTA ACTGATTTTG AGCAGATTAT TCTGGACCAC GACCGAAAAC GCGCGGGTCG GGCAGCTCCC GCCGAGGGGT TGTCGCTGGT TGAAGTTGGG TATCCGGCCG AGGTGATGAG CCGAAGGGAA AGCCCCTAA
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Protein sequence | MRYFLHLAYK GTKYHGWQRQ PNGLSVQEVL ETALSTVLRQ PIAIVGSGRT DAGVHAGQQF AHFDTDVALP TQLLRSLNSM IPPDIAVYEC FPVRPDDHAR FTAQSRYYQY QISRRKDPFR EGLVYVFTLP LNVELMNEAA SRLLHHIDFE SFSKVKTDVK TFNCQIEWAY WAQQPNGDLV FHIKANRFLH GMVRAIVGTL LAVGQERLSV TDFEQIILDH DRKRAGRAAP AEGLSLVEVG YPAEVMSRRE SP
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