Gene Slin_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1701 
Symbol 
ID8725438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2036460 
End bp2037611 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function DUF819 
Protein accessionYP_003386546 
Protein GI284036616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.479008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAACT CAATTTTCGT TCTTTTTATC CTCTGTTTGA ATGTCATCGT CTGCGAATGG 
CTCTCTACCA AACCTGGCTT TAGTCAGATT GGAACGGCTT TACTAATTAT TATTCTGACC
GCTATTGAGG CTAATCTGTA CCTTATTCCC ACTACAGAAA TACCCCTTTA TGAGGGAATT
TTTAACTATA TAGCTCCCTT CTCGCTCTTT CTTCTTTTGC TAAGTGTAAA CCTGAAAGAC
TTGCGCCGGG CTGGCCTGCC TATGGTAACG ATGTTTCTCA TCGGCTCTCT AGGTACGATT
ATTGGCGTTT TCACCAGCGT CTGGCTATTT GCCGCTCCAA ACACAGTCGG CAACTTGTAT
TATGCGCTGG CGGGCATGTT CACCGGAACC TACATTGGCG GCAGCGTTAA TTTTCACGCC
GTTGCCCTGC ATTACGGTGT ATCGAAAGCG GGCAATCTGT TCGTTGCCTC AACAGCAGCC
GATAATATTC TGACGGCTCT CTGGATGGCA GCAACCCTGG CGTTACCCCG CTTTTTCCAA
AGTCGGTTTC CAAGACATAT TCCGACAAGT CCAACAGTTG TATCAGAAAC TATAGCGGGT
GGAGCCGATC CATTTGCTGA TGCCGAGACC ATGAGCCCCT ACGATCTGGC CCTTTTGTTA
ACCCTGGGTT TTGGGTCTAT TTTCCTTTCG AAACAGTTGG TTACTCTTAT TCCTACGGTT
CCTTTCGTGC TGATTTTAAC CACCATTGCT CTGGCACTTG CCCAGTTCCG CGTAGTGAAC
AGACTCCGGG GAAGCCGATT ACTCGGGTTA TTTGGTATCT ATATTTTCCT GGCCGTAATC
GGTGCCTACT GCGATATTGC CACCCTTCTC CACAACGGTC GGCTAGCGAT CATACTCTTC
GGCATGATCC TAACCCTGGT GTTTATCCAT GCCTGTATCG TTTTTGGTGT GGGCGCCTTT
TTTAAGCAGG ATTGGGATGT GCTAAGTATT GCTTCTCAGG CTAATATCGG CGGAGCAACC
TCCGCACTGG CCCTGGCCAA GAGCCTTAAC CGGCCGGAAT TACAACTCCC GGCGGTGCTG
GTTGGCTCCC TGGGCAACGC AATTGGCTCT TATCTGGGTA TTTTAGTGGC CGAGATATTG
CGGGCAGGCT GA
 
Protein sequence
MTNSIFVLFI LCLNVIVCEW LSTKPGFSQI GTALLIIILT AIEANLYLIP TTEIPLYEGI 
FNYIAPFSLF LLLLSVNLKD LRRAGLPMVT MFLIGSLGTI IGVFTSVWLF AAPNTVGNLY
YALAGMFTGT YIGGSVNFHA VALHYGVSKA GNLFVASTAA DNILTALWMA ATLALPRFFQ
SRFPRHIPTS PTVVSETIAG GADPFADAET MSPYDLALLL TLGFGSIFLS KQLVTLIPTV
PFVLILTTIA LALAQFRVVN RLRGSRLLGL FGIYIFLAVI GAYCDIATLL HNGRLAIILF
GMILTLVFIH ACIVFGVGAF FKQDWDVLSI ASQANIGGAT SALALAKSLN RPELQLPAVL
VGSLGNAIGS YLGILVAEIL RAG