| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1642 |
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| Symbol | |
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| ID | 8725377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1975065 |
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| End bp | 1977041 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type 3a cellulose-binding domain protein |
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| Protein accession | YP_003386488 |
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| Protein GI | 284036558 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.117524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAT TTTTACGCTC ACTGAGCCTC GCATGGCTCT GGCTTACGGC CGTCTTCCTG
TTGCACGGAG CTATCGCGCA ACCTGTCCAG CAAGGTGACC CAACACCGCA AATCACCGTC
ACGCCTTCAT CACTGACCAT TCTGAATTAC AGTGAGTATG AAGGTCAGTT TCCGGCCAGT
TACACTGTTT CGGCCAGCGG GTTAACAAAT GATCTGGTCA TTACTGCTCC GCCTTACTTC
CTGCTCAGCG CCCGGGGAAA TACAGGGCCG AGCCTTTCCC TGCCGATTGT CAATGGGGAA
GTATCACCAA CACAGGTTTC GGTAATACTG CTCGCGTCGT CACCCGGTAC GTTTACCGGT
GTCGTTACCA ATGTCAGTGG CTCCGCAACA GCGACTGTGG CGGTGAGTGG AACCGCCATT
TCGGAGTCGG TGAGTGTAAG CCCCAGTACT CTGAATTCGT TTACGACAAC GGCCGGGCAG
CCTTCAGCTG TTCAATCCTA TACCGTTACC AGTCGTGGAG GTCTGTCTGT TGTTGTCAAT
GCTCCAGCCG GATTCGAGAT TCGTACGGGC AGCGCAGCGT TTGGCTCATC GCTGGTGATT
GGCCCGAGTT TGTCGTATAA GAATACACAG GTCGATGTAC GCTTGGTTGG AACAACGCCC
GGAACTGTTT CGGGGGTTAT AGCCAATGAT ACCTACTACC ACTCGGCTCA CCTTACGTAT
CCGGTAGCAG TGAGTGGCGT GGTTACACCG GTTACTGCAT CTGCTTCACT GAGCGTGCTG
CACCGCGATG CTGATTATGG CAATCGAACG GATCAGCTTA TCCGACCTTA CCTTGAGCTT
GGTAATGAAG GCACTACGGC CATTCCGTAT AGCCAGATTA CCCTGCGGTA TTGGTTTACC
TCCGAGGGGG GCTCACCACC TACCGATTTG CAGGTGTACT ACGCACAGAT GGGAACCCGT
TACGTCAGGA TGAAGTATGT GCCGCTTGCA GAGCCGCGCC AGGGGGCATT CGGTTATGTT
GAGTACAGTT TCGACGCATC GGCGGGGAGC TTAGCCGCCG GGAGTCGGTC GGGTCCGATT
GAGAACGGTA TCCTGAAGCA GGATCGGTCA GCCTTCAACG AGTCTGACGA TTATTCGTAT
GCTACTCCAA CTACGTTTAC GCGTAATACG CATGTAACGG CCTACCTGAA TGGGCGGCTT
ATCTGGGGGG AAGAACCCGC CCCTGCACTG GTATTGCGGC AGGTTAAGGT TTATTCGGCC
GCAAAAAACA GTGATATCAC CAGCAGTATC AGTACCGTTC TTGAGGTGCG TAATACAGGG
AATGTGGCAA TTCCTTTGCA GGATTTGACG GTACGCTATT GGTTTACGTC CGAAACGAGC
CAGCTGCTCA ATAGCTATAT TGATTATGCA CAAATAGGTG CTCAGACCAT TAAGCACAAC
GTTGTTCGAC TGGCACAGCC AGTGTCGGGT GCCGATAGCT ACCTTGAACT GAGCTTTTCG
GCTGGAGCCG CTGGCCTGGC ACCGCTGAGT AGTACAGGGC AAATTCTGTT TCGGCTGGTA
AAGCCTGACT TCTCGTTGCT GAACCAGGTA AATGATTATT CTCACGGTCC TGTAAACCTG
ACCGAAAACC CCCACATAAC CGTCTATCTA CAGGGAAATC TGATTTATGG TACCGAGCCG
CCGGGTGGCA TGGGACGTAT GGGTGTACCG GATGAAAACA AGTTATTACA GGTCACGCTA
TTGGGCAATC CGGTACAGAA TGAACAGTTG ATTCTGGAAG CGCGTGGTGC CCAGGGTCTT
CCTTTGGTTC TGCAACTGGT TGACCGTCAG GGCGTACAGG TATTCGGGAA GGAGGTAAGC
GAGGCCGCCG ACGTGGAGCG GCAGCAGCTG GAAATGAGTC GGCAACCGGC GGGGGTATAC
CTATTACGCA TACGTACACC GAATCAGGAG CGGGTACTTA AAGTAATCAA GCCATAA
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| Protein sequence | MSSFLRSLSL AWLWLTAVFL LHGAIAQPVQ QGDPTPQITV TPSSLTILNY SEYEGQFPAS
YTVSASGLTN DLVITAPPYF LLSARGNTGP SLSLPIVNGE VSPTQVSVIL LASSPGTFTG
VVTNVSGSAT ATVAVSGTAI SESVSVSPST LNSFTTTAGQ PSAVQSYTVT SRGGLSVVVN
APAGFEIRTG SAAFGSSLVI GPSLSYKNTQ VDVRLVGTTP GTVSGVIAND TYYHSAHLTY
PVAVSGVVTP VTASASLSVL HRDADYGNRT DQLIRPYLEL GNEGTTAIPY SQITLRYWFT
SEGGSPPTDL QVYYAQMGTR YVRMKYVPLA EPRQGAFGYV EYSFDASAGS LAAGSRSGPI
ENGILKQDRS AFNESDDYSY ATPTTFTRNT HVTAYLNGRL IWGEEPAPAL VLRQVKVYSA
AKNSDITSSI STVLEVRNTG NVAIPLQDLT VRYWFTSETS QLLNSYIDYA QIGAQTIKHN
VVRLAQPVSG ADSYLELSFS AGAAGLAPLS STGQILFRLV KPDFSLLNQV NDYSHGPVNL
TENPHITVYL QGNLIYGTEP PGGMGRMGVP DENKLLQVTL LGNPVQNEQL ILEARGAQGL
PLVLQLVDRQ GVQVFGKEVS EAADVERQQL EMSRQPAGVY LLRIRTPNQE RVLKVIKP
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