Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1636 |
Symbol | |
ID | 8725371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1968582 |
End bp | 1969793 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | aminotransferase class-III |
Protein accession | YP_003386482 |
Protein GI | 284036552 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATACGG TGACGAACCG GCAACTATTT TTTCAGCATA TAGCCCAGAC CTCCGATTTC CCCTTAGGGT TGGAAATTGA TCGGGCAGAG GGCGTATATC TTTTTGGAAA GCAGACGGAT GAGATCTACA TGGACCTTAT TTCGGGTATC GGCGTCAGTA ATGTCGGGCA TCGGCATCCG CACGTGCTGC GAGCCATTCA GAGCCAGTTA GATAAATACC TTCACCTGAT GGTGTATGGC GAGTACGTTC AGACACCTCA GACAGAACTG GCTCAGGCAC TGGCCCAAAC GCTGCCGACT AGCCTGAATA CCGTTTACTT TACCAACTCA GGCACCGAAG CCGTTGAAGG AGCCATGAAA TTGGCGAAAC GATACACTGG TCGGACGGAG ATTATCAGTT GCTTCAACGC CTACCACGGC TCCACACAAG GTGCCCTGTC GCTCTCGGGC GACGAAAACT TTAAACGTAA TTACCGCCCC CTCCTGCCCG ACATTCGGCA CATCCGGCAT GGTAACTGGC TCGATATTGA TCAGATCAGC GACCGTACTG CGGCTGTTGT CATGGAAGTC GTTTGCGGTG AAGCGGGCGT TCGGGTTCCC GACGCGGCTT ATATGCAGGC CGTTCGGCAA CGCTGTACCG ATACGGGCAC GCTGTTGATT TTCGATGAAA TTCAGACGGG TTTCGGCCGT ACGGGCACCT TCTGGGCGTT TGAAGACGTT GGCCCTGTTA TTCCCGACAT TTTGCTGTGT GCCAAAGGGA TGGGGGGCGG AATGCCCATC GGTGCCTTTA TCAGCTCGGC GGAAATTATG AGCGTGTTCC GGAACAATCC CATTCTGGGG CACATCACCA CCTTTGGCGG GCATCCGGTT TCGTGTGCGG CCTCCCTGGC CACGTTGCAG ATAATTCAGA CCGAAAAACT GCACGAACAG GCCAAAGCCA AAGGCCAATT GTTCCGGCAG TTGCTGACCC ACCCGGCTAT CCGGGAGGTA CGTGGAAAAG GATTGATGCT GGCCGTTGAA TTTGACTCGT TCGATGTACT GAAACCCGTT ATTGACCGAG CCATTCTGGG CGGTGTCATC ACCGACTGGT TTCTTTTCTG CAACAACTCG ATGCGTATCG CTCCCCCGTT GATAATCACG GAGGAGGAAA TCAGGAGAGC CTGCGCGGTC ATTCTCGAAG CGATTGAATA CGTAACGGTA CCTGTAAATT AA
|
Protein sequence | MYTVTNRQLF FQHIAQTSDF PLGLEIDRAE GVYLFGKQTD EIYMDLISGI GVSNVGHRHP HVLRAIQSQL DKYLHLMVYG EYVQTPQTEL AQALAQTLPT SLNTVYFTNS GTEAVEGAMK LAKRYTGRTE IISCFNAYHG STQGALSLSG DENFKRNYRP LLPDIRHIRH GNWLDIDQIS DRTAAVVMEV VCGEAGVRVP DAAYMQAVRQ RCTDTGTLLI FDEIQTGFGR TGTFWAFEDV GPVIPDILLC AKGMGGGMPI GAFISSAEIM SVFRNNPILG HITTFGGHPV SCAASLATLQ IIQTEKLHEQ AKAKGQLFRQ LLTHPAIREV RGKGLMLAVE FDSFDVLKPV IDRAILGGVI TDWFLFCNNS MRIAPPLIIT EEEIRRACAV ILEAIEYVTV PVN
|
| |