Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1556 |
Symbol | |
ID | 8725290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1870321 |
End bp | 1871619 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003386404 |
Protein GI | 284036474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTAA GTGCTAAAAC CCTGATTGAC CAGCGACCCA TTTCGCAACT ACAATACGCA ACCATCATTA TCTGCTTCCT GATGAACATG CTCGATGGCA TGGACGTCCT GGTGATTTCA TATGCGGCTC CGGCCATTGC GAAAAGCTGG AATATAGGAC CGGAAGCGAT GGGCGCCGTT TTTAGCTCCG GTTTGTTTGG AATGACGTTC GGGGCACTTT TTCTGGCTCC CTACGCCGAT CTTATTGGCC GAAAAACCCT CATTCTCATT AGTGCTGCTA TTATGGGCAT CAGTATTTAC CTGACGTCTT TTTCGACCGG ACTTCTTCCG TTGATCGTGT TTCGATTTAT TAGCGGGCTG GGTATCGGGA GCATGCTGGC GAGTACGGCC GCACTCGCAG CTGAATACAC GCCCAACAAA ACCCGCGATT TCTGGGTAAG CTTCGTGGTG TCGGGTTATC CAGTCGGGGC TGTTTTGTCG GGATTGGTAG CGGCCCGGAT CATTCCGGTA TCGGGTTGGC AAACCATGTT CCAGATTGCC GGGGTAACTT CTTTTCTGGC CTTGCCACTA ATTCAGTTCT TTCTGGCCGA GTCGCTCGAT TTTTACCTCA AATCACAACC GGATCAGGCA CTTGGGAAAG CGAATGGCAT TTTGGGGAAA ATGGGCCATT CGCTCATTGA TGCCCTACCG CACAAACCAG CAAAAGGTAA CGGCATTCCT ATTAAATCGC TGCTCGAAAA CGAATACAAA ATACCGACGA TTCAGCTTTG GACGGCTTTG TTTCTTTCTT TCGCAACGCT CTATTTCCTC ACCAGCTGGA TTCCTAAACT GGCCACCAAT GCTGGTCTTC CGATCGAGCT GGCTATTTAC GCCGGTACGA TTTTTAACGT CGGAGCGTTT TTCGGCATCA CAGCTCAGGG CTATCTTTCC AGTCGTTTCG GCCTTAAGAG AACGATTGGC TTATTTCTGA TTATGACGGG CGTTGTCATG GCGGCTTTTC AGCTTTTTAT GGGATCATCT ACGCTACTGT TGGTGTTTGC CGTGCTTGGT TTCGGTATTC AGGGAGGCTT TGTAGGTCTC TACGCCGTAG CGGCTCGCAT GTACCCAACG GAGTTCAGAA CCACCGGCGT GGGCTGGTCG ATTGGCATTG GCCGACTGGG GGGAATTATT GGCCCGGCAG TGGGCGGTGT ACTGATCGGA ATGGGCTTGT CGATAGTAAC GAACTTTCTG ATCTACGCCG TCCCGACGAT TTTCGCGGGC ATTATGACGA TGTACATTTC GTCGAAGAAA ATAAGCTGA
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Protein sequence | MEVSAKTLID QRPISQLQYA TIIICFLMNM LDGMDVLVIS YAAPAIAKSW NIGPEAMGAV FSSGLFGMTF GALFLAPYAD LIGRKTLILI SAAIMGISIY LTSFSTGLLP LIVFRFISGL GIGSMLASTA ALAAEYTPNK TRDFWVSFVV SGYPVGAVLS GLVAARIIPV SGWQTMFQIA GVTSFLALPL IQFFLAESLD FYLKSQPDQA LGKANGILGK MGHSLIDALP HKPAKGNGIP IKSLLENEYK IPTIQLWTAL FLSFATLYFL TSWIPKLATN AGLPIELAIY AGTIFNVGAF FGITAQGYLS SRFGLKRTIG LFLIMTGVVM AAFQLFMGSS TLLLVFAVLG FGIQGGFVGL YAVAARMYPT EFRTTGVGWS IGIGRLGGII GPAVGGVLIG MGLSIVTNFL IYAVPTIFAG IMTMYISSKK IS
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