Gene Slin_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1477 
Symbol 
ID8725211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1789308 
End bp1790570 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content57% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003386326 
Protein GI284036396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.699089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATA AGGCCTCGAA TAGGATCGGT ATTGTTGGCG GAGGCATCAT CGGGTTAAGT 
TCGGCCTACT ACCTGCACAA GGCGGGTTAT CAGGTGACCC TCTTTGATCA GAACCCCATT
TTAGACGGCT GCTCGTTCGG TAATGCCGGT ATGATTGTGC CCAGCCACAT CATTCCGCTG
GCTCAGCCGG GCATGATTGC CAAAGGTATG CGCTGGATGC TCGACTCGAC CAGCCCGTTC
TACGTCAAAC CCAGGCTGAA TCTGGAACTG GCCCGCTGGG GCTGGCTCTT TTTCAGAAAC
TCGACCCCCG AGCATGTCGA ACGCTCCATT CCGGTTCTGC GCGACATCAG CCTGCTCAGT
AAGGCGTTGT ATCAGGATTT AGCTGCCAAT GGCGACCTCG ATTTCGAGTG GCAGGAACGG
GGCCTGATGA TGCTCTATAA AACCGCATCG GCCGAGCACG AAATGGCCGA AGAAGCCGAT
GTTGCCAACC GGGCGGGTAT CGAAGCCCGC GTACTGACGG GTCAGCAGGT TCAGGACCTG
GAGCCCAACG CCCGGGTCGA TGTTCGGGGA GCGGTGCTAT ACCCTGGCGA TGCGCACCTC
AACCCCGGTG AACTGATCCG TTCGCTGGTG ACCTATCTGC GCAAAGAGGG CGTTATTATT
CACGAAAGTC AGGCGGTAAC GGGTTTTGGC AAGACGGGCT CCCGCATAAA ATCCGTTCAG
ACAGCCCAGG GCGACTACCC CGTTGATCAA CTGGTGGTGG CTGGTGGCGC CTGGTCTCCC
GCCCTAGCCC GCATGCTGGA CCTGAGCCTG TCCATGCAGG GCGGAAAAGG CTATAGCTTT
GTACTTCGAA ACCTGACCAA CAACGTGCGG ATTCCGGCCA TCATGCTCGA AGCCCGCGCT
ACAGCCACCC CTATGGGCAG CGACCTGCGT TTTGCCGGTA CGCTCGAAGT GGCGGGTACC
GACATGACGG TCAATATGAA CCGGGTACGC GGGATTGTTC AGTCGATTAA CCAGTACTAC
CCTGACATTC CGGTTACCAT GCCCGACGTC GATGTGGTCT GGCGTGGCTT ACGTCCCTGC
TCCCCCGATG GTTTGCCGTA TATCGGCCGT ACCAAACGCT ATGAAAACGT GGTACTTGCT
ACCGGGCACG GCATGATGGG CCTGAGCCTT GGGCCGGGTA CGGGCAAACT GGTTAGTGAA
GAAATTGGCG GCAAGGCGGA TAGTATGGAT ATTGCTGCGT TTAGCCCGGA TCGTTTTTCA
TGA
 
Protein sequence
MTHKASNRIG IVGGGIIGLS SAYYLHKAGY QVTLFDQNPI LDGCSFGNAG MIVPSHIIPL 
AQPGMIAKGM RWMLDSTSPF YVKPRLNLEL ARWGWLFFRN STPEHVERSI PVLRDISLLS
KALYQDLAAN GDLDFEWQER GLMMLYKTAS AEHEMAEEAD VANRAGIEAR VLTGQQVQDL
EPNARVDVRG AVLYPGDAHL NPGELIRSLV TYLRKEGVII HESQAVTGFG KTGSRIKSVQ
TAQGDYPVDQ LVVAGGAWSP ALARMLDLSL SMQGGKGYSF VLRNLTNNVR IPAIMLEARA
TATPMGSDLR FAGTLEVAGT DMTVNMNRVR GIVQSINQYY PDIPVTMPDV DVVWRGLRPC
SPDGLPYIGR TKRYENVVLA TGHGMMGLSL GPGTGKLVSE EIGGKADSMD IAAFSPDRFS