Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1477 |
Symbol | |
ID | 8725211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1789308 |
End bp | 1790570 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003386326 |
Protein GI | 284036396 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.699089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACATA AGGCCTCGAA TAGGATCGGT ATTGTTGGCG GAGGCATCAT CGGGTTAAGT TCGGCCTACT ACCTGCACAA GGCGGGTTAT CAGGTGACCC TCTTTGATCA GAACCCCATT TTAGACGGCT GCTCGTTCGG TAATGCCGGT ATGATTGTGC CCAGCCACAT CATTCCGCTG GCTCAGCCGG GCATGATTGC CAAAGGTATG CGCTGGATGC TCGACTCGAC CAGCCCGTTC TACGTCAAAC CCAGGCTGAA TCTGGAACTG GCCCGCTGGG GCTGGCTCTT TTTCAGAAAC TCGACCCCCG AGCATGTCGA ACGCTCCATT CCGGTTCTGC GCGACATCAG CCTGCTCAGT AAGGCGTTGT ATCAGGATTT AGCTGCCAAT GGCGACCTCG ATTTCGAGTG GCAGGAACGG GGCCTGATGA TGCTCTATAA AACCGCATCG GCCGAGCACG AAATGGCCGA AGAAGCCGAT GTTGCCAACC GGGCGGGTAT CGAAGCCCGC GTACTGACGG GTCAGCAGGT TCAGGACCTG GAGCCCAACG CCCGGGTCGA TGTTCGGGGA GCGGTGCTAT ACCCTGGCGA TGCGCACCTC AACCCCGGTG AACTGATCCG TTCGCTGGTG ACCTATCTGC GCAAAGAGGG CGTTATTATT CACGAAAGTC AGGCGGTAAC GGGTTTTGGC AAGACGGGCT CCCGCATAAA ATCCGTTCAG ACAGCCCAGG GCGACTACCC CGTTGATCAA CTGGTGGTGG CTGGTGGCGC CTGGTCTCCC GCCCTAGCCC GCATGCTGGA CCTGAGCCTG TCCATGCAGG GCGGAAAAGG CTATAGCTTT GTACTTCGAA ACCTGACCAA CAACGTGCGG ATTCCGGCCA TCATGCTCGA AGCCCGCGCT ACAGCCACCC CTATGGGCAG CGACCTGCGT TTTGCCGGTA CGCTCGAAGT GGCGGGTACC GACATGACGG TCAATATGAA CCGGGTACGC GGGATTGTTC AGTCGATTAA CCAGTACTAC CCTGACATTC CGGTTACCAT GCCCGACGTC GATGTGGTCT GGCGTGGCTT ACGTCCCTGC TCCCCCGATG GTTTGCCGTA TATCGGCCGT ACCAAACGCT ATGAAAACGT GGTACTTGCT ACCGGGCACG GCATGATGGG CCTGAGCCTT GGGCCGGGTA CGGGCAAACT GGTTAGTGAA GAAATTGGCG GCAAGGCGGA TAGTATGGAT ATTGCTGCGT TTAGCCCGGA TCGTTTTTCA TGA
|
Protein sequence | MTHKASNRIG IVGGGIIGLS SAYYLHKAGY QVTLFDQNPI LDGCSFGNAG MIVPSHIIPL AQPGMIAKGM RWMLDSTSPF YVKPRLNLEL ARWGWLFFRN STPEHVERSI PVLRDISLLS KALYQDLAAN GDLDFEWQER GLMMLYKTAS AEHEMAEEAD VANRAGIEAR VLTGQQVQDL EPNARVDVRG AVLYPGDAHL NPGELIRSLV TYLRKEGVII HESQAVTGFG KTGSRIKSVQ TAQGDYPVDQ LVVAGGAWSP ALARMLDLSL SMQGGKGYSF VLRNLTNNVR IPAIMLEARA TATPMGSDLR FAGTLEVAGT DMTVNMNRVR GIVQSINQYY PDIPVTMPDV DVVWRGLRPC SPDGLPYIGR TKRYENVVLA TGHGMMGLSL GPGTGKLVSE EIGGKADSMD IAAFSPDRFS
|
| |