| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1419 |
|---|
| Symbol | |
|---|
| ID | 8725153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1724716 |
|---|
| End bp | 1726662 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Glycoside hydrolase 97 |
|---|
| Protein accession | YP_003386268 |
|---|
| Protein GI | 284036338 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.067122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.614514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATA CACTTTGTAT TTTGTTATTA GCCAGCTTTT GGGCAAATGC ACAAAACACA
CCCACAACGG TGAGCAGTCC GGATGGGAAA TTAGTGGTAA CAGTATCGCT GGAAAATGGA
AAACCGGCCT ACAGCGTTTC GCTTAACGGA AAATCGTTTT TAGGTAAATC ACCACTGGGT
GTAAAGACAA ACGTGGGCGA TTTTTCAGAG GGACTTGTCG TGAGCAAAAC GGCAACGCTT
ACCAAGATTG ATAAGTCATA CGAGTTGCCG AACATCAAAA AAAGTAAGGT TCATTACGTA
GCCAATGAGG CCGTCATTTC TTACTCGAAA GACAATGCCC CTGCCATCGA TATTACGTTC
AGGGTCAGCA ACAATGACGT GGCGTTCAGG TATAAAGTTT ACCCACAAAA AGCGTCCCGT
TCCTGCGTAA TCAATGAGGA GGTTTCGGGC TTTGTGTTGC CCGCCGGTAC AACCACGTTT
TTGTCAGCCC AAAGCAAAGC GATGGTAGGT TTTGCCCGAA CGATGCCCAG CTACGAGATT
CCGTATACGG TTGATGACAC ACTGAGCGAG AACGGCCGGG GCAATGGCTA CACGTTTCCC
TGCTTATTCA AAGTCAATAC CAACGGCTGG GTATTGATCT CCGAAACGGG CGTCGACAGC
CGGTATTGCG CGAGCCGCCT GCTGGGCCGT CCGGGTGGAT TGTACACCAT TGGCTTTCCG
ATGCCTGACG AAAACAACGG CATCGGCACC TCGGCACCCG GCATTCCCCT GCCCGGCGAA
ACGCCATGGC GCACCATTAC TGTTGGCGAG ACACTGGCTC CCATCGTAGA AACCACCGTG
CCGTTCGACG TCGTTGGCCC CCGCTACGAG GCTTCGCAGC CGTATCGCTA CACAAAAGGT
AGCTGGAGCT GGATTATCGG TATGGATGGC CGGACGGTAT ATGATGAACA AATCAGATAC
ATTGATTTCA GCGCGGCTAT GGGCTACCAA ACCGTGTTGA TCGACGCCCT GTGGGATACC
CAAATTGGAA GGGATAAAAT AGCCGAACTG GCCAAATACG CGGCTACTAA AGGCGTTAGC
CTATATTTAT GGTACAACTC CAACGGGTAT TGGAACGACG CCCCACAAGG GCCACGGGGT
ATCATGGATA ATACCATTGC CCGTCGAAAG GAAATGGCCT GGATGAAGCA GATTGGCGTA
AAAGGCATCA AAGTCGATTT TTTCGGGGGC GATAAGCAGG AAACCATGAA GCTGTACGAA
GACATTCTGT ACGACGCCAA CGACTTCGGC ATCCTGTGTA TTTTTCACGG TTCGACATTG
CCCCGTGGGT GGGAACGCAT GTACCCCAAC TATGCCGCCA GCGAAGCCGT TCTGGCCAGC
GAAAACCTCG CTTTTTCGCA ACGGAGCTGT GATATGGAAG CATTCAACGC TACGATTCAC
CCATTTATCC GTAACACGGT AGGCAGCATG GACTTTGGCG GCAGTGCGTT GAACAAATTT
TACAATGCTA CGAACACCCC AAACCGGGGC TCCAAACGGG TTACGTCGGA TGTGTATGCG
CTGGCCACTG CGGTCCTGTT TCAGAGTGGT GTTCAGCATT TTGCGCTGGC ACCCAACAAC
CTCACCGATG CACCAGCCTG GGCAATCGAC TTTATGAAAA CCGTGCCGAC GACCTGGGAC
GAAGTTCGTT ACATCGACGG CTATCCGGGC AGGTATGTGG TTCTGGCACG CCGTCAGGGT
ACGAAATGGT ACGTAGCCGG TGTGAATGCC CAAAAAGAGC CAGTTAAGCT GAAACTAAAA
TTACCCATGA TTGCCGCTGG GGCTGAATAC AAACTATACA GCGATGATGC GCAATTGACG
GGTAACGTAA CCACGGCAAA GCTGCCGAAA AATCAGGAAG TAGACTGGAT AATTCCGACA
AACGGAGCCG CGCTGCTGGT GAACTGA
|
|---|
| Protein sequence | MKYTLCILLL ASFWANAQNT PTTVSSPDGK LVVTVSLENG KPAYSVSLNG KSFLGKSPLG
VKTNVGDFSE GLVVSKTATL TKIDKSYELP NIKKSKVHYV ANEAVISYSK DNAPAIDITF
RVSNNDVAFR YKVYPQKASR SCVINEEVSG FVLPAGTTTF LSAQSKAMVG FARTMPSYEI
PYTVDDTLSE NGRGNGYTFP CLFKVNTNGW VLISETGVDS RYCASRLLGR PGGLYTIGFP
MPDENNGIGT SAPGIPLPGE TPWRTITVGE TLAPIVETTV PFDVVGPRYE ASQPYRYTKG
SWSWIIGMDG RTVYDEQIRY IDFSAAMGYQ TVLIDALWDT QIGRDKIAEL AKYAATKGVS
LYLWYNSNGY WNDAPQGPRG IMDNTIARRK EMAWMKQIGV KGIKVDFFGG DKQETMKLYE
DILYDANDFG ILCIFHGSTL PRGWERMYPN YAASEAVLAS ENLAFSQRSC DMEAFNATIH
PFIRNTVGSM DFGGSALNKF YNATNTPNRG SKRVTSDVYA LATAVLFQSG VQHFALAPNN
LTDAPAWAID FMKTVPTTWD EVRYIDGYPG RYVVLARRQG TKWYVAGVNA QKEPVKLKLK
LPMIAAGAEY KLYSDDAQLT GNVTTAKLPK NQEVDWIIPT NGAALLVN
|
|---|
| |