| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1263 |
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| Symbol | |
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| ID | 8724996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1550478 |
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| End bp | 1551371 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003386112 |
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| Protein GI | 284036182 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.281951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTAT CGAATGTATC GGGTATGCCG GCGGGCCAGT GGGCACCAAT TGGCTTCAAT
TTGTTAGTCT GGACGGCCGC CATATCCGAA GAAATGAACC CCGTTGCTGA ACGCCTGAAA
ACGATTGGCT ACGACGGCGT TGAATGCTTT ATTGACCAGC AGGACGTTCG TGTTTATCAG
CAATTCGGCG ACCACCTGAA GCAGCTGGGG TTGCAAAGTA CCTGTGTAAC CGTGGTCGGG
CCAGACGAGA ATCCGGCCAG CGAATCGGCC AAAGTGCGCG AACAGGCGGT CGTTCAATTG
AAAGGCGTAG TCGACCGGGC GCATGCGCTG GGCGCAACGG TCATTTGTGG GCCGTTCCAC
TCCGCCTTTG CCACTTTCTC CCGACGCGAA CCGCAACCTG ACGAATACGC TTACAGTGCC
GAGGTGCTGC ATACGGTGGG CGAGTATGCC AAACAGGCAA ATATCGTCCT GGCCCCCGAA
GCCCTCAACC GGTTTGAGTG TTACCTCTGC AACACCATGA GTCAACTGAT CGAACTGGTA
CGGAAGGCCG ATCATTCCAA TGTGCGGGCC ATGTTCGATA CCCACCATGC CAACATGGAG
GAAAAACATT TTCCTGACGC TATTAGAACC ATTGCCCCCG TGCTGGCCCA CGTACACATT
AGCGAAAACG ATCGGGGCAC CCCCGGCGAT GGACACATTC CCTGGGACGA TACTTTCCGG
ACGCTTTCCG AACTGAATTA TTCCGGCTGG ATGACCATCG AAGCGTTTAC CCGAAACGAC
ATCAATTTTG CAAATTCAAT CAACGTCTGG CGGGAATTCA GCAAACCGTG GGACATCGCC
GAAAACGGTC TTAAATTCAT CAAAGCCATG CAGGCTAAAT ACGCTAACGT ATAA
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| Protein sequence | MSLSNVSGMP AGQWAPIGFN LLVWTAAISE EMNPVAERLK TIGYDGVECF IDQQDVRVYQ
QFGDHLKQLG LQSTCVTVVG PDENPASESA KVREQAVVQL KGVVDRAHAL GATVICGPFH
SAFATFSRRE PQPDEYAYSA EVLHTVGEYA KQANIVLAPE ALNRFECYLC NTMSQLIELV
RKADHSNVRA MFDTHHANME EKHFPDAIRT IAPVLAHVHI SENDRGTPGD GHIPWDDTFR
TLSELNYSGW MTIEAFTRND INFANSINVW REFSKPWDIA ENGLKFIKAM QAKYANV
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