Gene Slin_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1260 
Symbol 
ID8724993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1545174 
End bp1546193 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003386109 
Protein GI284036179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.785941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATT CAGTAGTGTG TGTGACGCCC CGACAACTGG CGTATCAGCA AGTACAAAAG 
CCTGTTGTTA CACCGGGACA TGCCATTCTT AAAATCAGAC GGATTGGTAT CTGCGGCACC
GATTTACACG CCTTCGAGGG CACACAGCCC TATTTTACGT ACCCCCGCAT TCTGGGCCAC
GAACTGGCGG CCGATCTGGT CGATGCGGAC GATGCCCCTG GCTTTTCGGT AGGGGAGGCC
GTTACGTTTC TGCCGTATTT CAACTGTGGG TATTGCATTG CCTGCCGAAC CGGCAAACCA
AACTGTTGCG TTCGGCTGCA GACCGTTGGC GTTCATATCG ACGGCGGTAT GGTCGAGTAT
TATTCCGTTC CGGTGCACAC GCTGGTGCAT GGGCAGGGAC TATCGCATGA CGAACTGGCG
CTGGTAGAAC CCCTGTCGAT TGGCGCGCAT GGCGTTCGTC GGGCCGACAT TCAGCCGGGC
GAAAATGTGC TCGTGGTGGG AGCGGGGCCT ATTGGGTTAG GAACGATGGA GTTTGCCCGG
ATTGCCGGGG GAACGGTCAT TGCGATGGAT ATTAACGCTG GACGGCTGGA TTTCTGCCGG
ACGCAGCTTG GCGTTCATCA TACCATCAAT GCACAATCGG CGGATGTGAT GGAGCAACTG
GCAGCTATCA CCAATGGCGA TATGCCTACG GTGGTCATCG ACGCCACCGG TAGTTTACGA
GCCATAAACA CCGCCTTTTC GTATCTGGCG CACACGGGTC GGTACGTGCT GGTGGGTTTG
CAGAAAGGCG ACATCAGCGT AAGCCACCCG GAATTACACA AGCGGGAAGC TACCCTCATG
AGCAGCCGCA ACGCAACCCG CGCCGATTTC GACCATGTCA TTGCCAGCAT GAAAGCTGGT
TTGGTAAAAC CTACAACCTA CATCACCCAC CGCGTTGGTT TCGACCAGAT TGTACGTGAG
TTCGATAGCT GGCTGGACCC CGCCAATGGC GTCATTAAAG CCATGGTGTC GCTTGGCTAA
 
Protein sequence
MMDSVVCVTP RQLAYQQVQK PVVTPGHAIL KIRRIGICGT DLHAFEGTQP YFTYPRILGH 
ELAADLVDAD DAPGFSVGEA VTFLPYFNCG YCIACRTGKP NCCVRLQTVG VHIDGGMVEY
YSVPVHTLVH GQGLSHDELA LVEPLSIGAH GVRRADIQPG ENVLVVGAGP IGLGTMEFAR
IAGGTVIAMD INAGRLDFCR TQLGVHHTIN AQSADVMEQL AAITNGDMPT VVIDATGSLR
AINTAFSYLA HTGRYVLVGL QKGDISVSHP ELHKREATLM SSRNATRADF DHVIASMKAG
LVKPTTYITH RVGFDQIVRE FDSWLDPANG VIKAMVSLG