Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1240 |
Symbol | |
ID | 8724973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1514011 |
End bp | 1514712 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003386089 |
Protein GI | 284036159 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.538948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.136467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCATT ACACGCATCC AAACAGAATA CTTGTTGCTT TAGACTGTAT TATATTCGGG TTTGATGGCG AAGAACTTAA ACTACTGTTA ATCAAGCGAA ATTTCGAGCC GGAGCGGGGC AAATGGTCAT TGATGGGCGG TTTTTTGAAG GAAGATGAAG ACCTTGAATC GGCAGCACAA CGCATTTTGT TCGACCTGAC GGGCATCACA AATACCTACC TGGAGCAATT GCAGACCTTT GGGGCCGTCA ACCGCGACCC CGTAGAGCGA ACGATCTCGG TCGTTTATTA TGCGCTGGTC AATATTCAGG ATCAGGATTT GAACGCCATT CGATCCCATA ATGCCTCCTG GATTGGTCTC AATGAGAAAC CAAACCTGAT TTTCGACCAC AATACGATGG TTGAACAGGC CCTTCACCGA CTACGGTACA AAGCAGCACT TCACGCCATT GGCTTTGAAT TGATGCCGGA GAAATTTACC ATTCCCCAGC TTCAGAAAGT GTATGAAGCC ATTTATACCA AACAGCTCGA CCGGCGCAAT TTCAGTCGCA AGATCCTGTC TACCGATCTG CTCATTGGCA CCGGCGAAAA AGACACGGCT TCGGTCACCA AAAAAGGGCA GCTATACCGG CTCAATGCGG AAAAGTACCA GCAATACCTC ACCGACTACG TGAGTTTCTT CCCGGAGTTG ACGCTGGCAT AG
|
Protein sequence | MIHYTHPNRI LVALDCIIFG FDGEELKLLL IKRNFEPERG KWSLMGGFLK EDEDLESAAQ RILFDLTGIT NTYLEQLQTF GAVNRDPVER TISVVYYALV NIQDQDLNAI RSHNASWIGL NEKPNLIFDH NTMVEQALHR LRYKAALHAI GFELMPEKFT IPQLQKVYEA IYTKQLDRRN FSRKILSTDL LIGTGEKDTA SVTKKGQLYR LNAEKYQQYL TDYVSFFPEL TLA
|
| |