Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1235 |
Symbol | |
ID | 8724968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1506786 |
End bp | 1507949 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Aldose 1-epimerase |
Protein accession | YP_003386084 |
Protein GI | 284036154 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.153244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTT TGCCCCAACT CCTATCGCTG GCTCTGTTAA CAAGTTGCCT AACTATGACC TCTTGCTCTT CTAAAAAAGA AAACGAATCC GACGACCAAA AGCCGGGTAT CGAAAAAACG ACCTACGGGC AACTCCCCGA CGGACAAACG GCTGATCTCT ATACCCTACG CAACGCAGCC GGTATGACAG CCCAGATTAC CAACTATGGC GGCATCATTG TAGGCTTGAA AACGCCCGAC AAAGATGGCA AGTTTGAGGA TGTTACATTA GGGCAGGACT CGCTGTCAAG TTATGTAAAG AACAACCCTT ATTTCGGCGC GCTGATTGGC CGGTATGGCA ACCGGATTGC CAAAGGTAAA TTTACCCTCG ATGGCAAGAC CTACGACCTG TTCATCAACA ACATGGGCAA CCACCTGCAT GGCGGTAAAG TAGGTTTCGA TAAAGTACTC TGGACAGCCA CTCCAGTTGA GGGCGACGAG CCCGCACTTA AGCTGGCGTA CACGGCAAAA GATGGCGAAG AAGGCTATCC AGGCAACCTG TCGGTGGAAG TAACATACAC GCTGCAAAAA GACAATGCCC TTAAGATCGA TTATAAAGCC ACAACAGACA AACCAACGGT GGTGAACCTG ACCAACCACA CGTATTTCAA TCTGACGGGT GGTGCCAAGC GCGATATTCT GGACCATGTG GTAACGCTCA ACGCCGATAA GCTGATCGCC GTAGACCAGA CGCTGATTCC GACCGGCGAA CTGAAGCCTG TAGCGGGCAC TCCGTTCGAT TTCCTCAAGC CATCGGTTGT GGGGTCGCGC ATCAACGATT CGACGGATAC CCAGATTAAA TACGGCGGTG GCTATGACCA CGGCTGGGTG CTGAACGGTT CCGGTGATTC ACTGAAACTG GCCGCTACCG TTTACGAACC CACATCGGGC CGGGTTATGG AAGTACGCAC AACGGAGCCC GCCATACAAT TCTATACCGG CAATTTTCTG GATGGCAGCG TTACCGGCCG GGAAGGATTT CCGTACAAAA AACGGTACGC CCTCTGCCTG GAAACGGAAC ACTACCCCGA TTCGCCAAAC CATCCGGCTT TCCCAACTAC AGAGCTGAAA CCCGGTCAGA CGTACAAAAG CACAACCATC TATCAGTTCT CGACAAAGAA GTAA
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Protein sequence | MKFLPQLLSL ALLTSCLTMT SCSSKKENES DDQKPGIEKT TYGQLPDGQT ADLYTLRNAA GMTAQITNYG GIIVGLKTPD KDGKFEDVTL GQDSLSSYVK NNPYFGALIG RYGNRIAKGK FTLDGKTYDL FINNMGNHLH GGKVGFDKVL WTATPVEGDE PALKLAYTAK DGEEGYPGNL SVEVTYTLQK DNALKIDYKA TTDKPTVVNL TNHTYFNLTG GAKRDILDHV VTLNADKLIA VDQTLIPTGE LKPVAGTPFD FLKPSVVGSR INDSTDTQIK YGGGYDHGWV LNGSGDSLKL AATVYEPTSG RVMEVRTTEP AIQFYTGNFL DGSVTGREGF PYKKRYALCL ETEHYPDSPN HPAFPTTELK PGQTYKSTTI YQFSTKK
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