Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1168 |
Symbol | |
ID | 8724901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1426933 |
End bp | 1428378 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386018 |
Protein GI | 284036088 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.685851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGGAT ATAAATATTT GCTTTTTACA GGCTTGCTGA CCACAACCCT GGCCTGTAAT GATTTTGGGG ATATAAATGT AAACCCAAAC AGTGCCCTTT ACCCCAATAC TGCTAGTTTG ATTACCGGGG CAGAGCGTAC GGTGGGCACT ATAAACTCGC AGGTTGGACC GGGTGGGTTT AACATTGCCC CTGCTTTATA CGTACAGCAG TTCTCGGACG TAACGTATAT TGAGGACTCC CGCTACAAGA CAATCAACTT CAGCTACAAC GGCTTGTATT CGGGACCGCT GGTGAACCTT CAGGCGATCA TTGACCAGAA TACCAATGAA TCGACGCGGG GACTGGCAGC TAGCTATGGC TCCAATGGGA ACCAGATTGC CATTGCGCGT ATCCTGAAAG CGTATGTGTT TCAATACATT ACCGACCGTT GGGGCGATGT GCCTTACTCG CAGGCCTTAA AAGCCGATCA GAACTTCTCG CCCGCTTTCG ACAAGCAGCA GGATATTTAT AACGACCTGT TCAAAGAGTG GAAAGAAGCA GCAAAGCAGT TCGACGGTGG TAAAGCCGTC AGCGGTGACA TCATGCTGGC CAGCAACGCT ACCCGCTGGA AAAAATTTGC GGCTTCCCTG CGGTTAATTG CTGCTCTGCG GTTGTCGAAA GTTGACCCAG CCAAGGGTAA AACGGAGTTT GCTGCGGCCC TGGCCGATGG TGTATTAGCG TCAAATGCCG ATAACGTGCA GTATAAGTAT CTGGCCGATG CAAATAATGA AAATCCGCTC TACACGAACT ACGTACGGTC GAACCGGAAA GATTTCGCCC TGAGCAACAC GTTCGTTAAT TACCTGAAGC AGGTGAACGA CCCTCGTTTG CCCGTCTTTG CGGCCAAGAA CCTGAAAGGT GAGTACGTAG GTGCTCCTTA CGGTGTTTTC CCGGCTCCGG GTAAAGCTCA GGATTATTCG CTGGCAGGGG CTGCTATTAG CGCACAAACG GCTCCGGTTA ACATTATGAC CTACGCTCAA GTGCTGTTTG CTCAGGCCGA AGCGGCTAAA CTGGGTTGGA TTACCGGCGA TGCCAAAGCT CTGTATGAAT CGGCAATTAA AGCGTCTATG CAGCAGTGGT TAGGTACATC GTATACAGAT GCCGCTTTTG CCGCCTATAT TGCTCAGCCA GATGTTGCCT ATAGCGATGC CAAGGCCATT GAACTTATTG GAAATCAGCG CTGGATTGCG TTGTTCTTTC AGGGAACCGA ATCCTGGAAC GAATGGCGTC GGACGGGTTA CCCAAGTTTA AAACCGGCAC CCACCACTCT GAACGGAGGA ACGGCTATTC CCCGTCGGTT AGCTTACCCA ACCACAGAAA CAACACTGAA CGCTAAAAAC TATGCTGAAG TAGTGACCCG TCAGGGAAAA GACGATCAGT ACACGCGCGT TTGGTGGGAT AAATAA
|
Protein sequence | MKGYKYLLFT GLLTTTLACN DFGDINVNPN SALYPNTASL ITGAERTVGT INSQVGPGGF NIAPALYVQQ FSDVTYIEDS RYKTINFSYN GLYSGPLVNL QAIIDQNTNE STRGLAASYG SNGNQIAIAR ILKAYVFQYI TDRWGDVPYS QALKADQNFS PAFDKQQDIY NDLFKEWKEA AKQFDGGKAV SGDIMLASNA TRWKKFAASL RLIAALRLSK VDPAKGKTEF AAALADGVLA SNADNVQYKY LADANNENPL YTNYVRSNRK DFALSNTFVN YLKQVNDPRL PVFAAKNLKG EYVGAPYGVF PAPGKAQDYS LAGAAISAQT APVNIMTYAQ VLFAQAEAAK LGWITGDAKA LYESAIKASM QQWLGTSYTD AAFAAYIAQP DVAYSDAKAI ELIGNQRWIA LFFQGTESWN EWRRTGYPSL KPAPTTLNGG TAIPRRLAYP TTETTLNAKN YAEVVTRQGK DDQYTRVWWD K
|
| |