| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1000 |
|---|
| Symbol | |
|---|
| ID | 8724730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1215768 |
|---|
| End bp | 1216880 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | GHMP kinase domain protein |
|---|
| Protein accession | YP_003385850 |
|---|
| Protein GI | 284035920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00600942 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.518194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCTAT CAGTTGATAC AAATTCCATT AAGGTATCCA CTCCCGGCCG TATCTGCCTT
TTTGGCGAAC ATCAGGACTA TTTAGGGCTG CCTGTTATTG CTGCGGCTAT ATCCCGCCGT
ATTCAAGTAG CCACCCATCG CGTAGATCAG CGCGGGTTTC GGCTGAATTT GCCGGATATC
AATGACACCG TCAACATTCC GTTCGACGGT CAGGAACTTC CTTACCCACA AATTCGGGAT
TACTTCCGTT CGGCCGTCAA TGTGCTGCTA CGGGAGGGGT TCACTTTTCA GAAAGGAATT
GAAGGCGAGG TACATGGCAA TATTCCAATT AATTCGGGCA CCTCAAGCTC GTCGGCCCTG
CTGGTTTCCT GGCTTAATGT GTTGACTCAA TTATCCGATC AAGCAACGCA ATTGTCTGCC
GAACAGATAG CGGAGCTGGC GTATATGGCT GAAGTACTGG AGTTTGGCGA GCCCGGTGGC
ATGATGGACC ACTACTCCAC GGCAGTTGGC AACGTCATTT ATCTGGAGTC GCAGCCTAAA
ATCCGACTGG AAAAGCTTAC TCCGCCCCTG GGTGCGTTTG TTCTGGGCGA TTCGCAGGAG
CCGAAAGATA CGATTGGGAT TCTGAGTCGG GTGAAGGTCG GCATGCTGGA CATTATCCAG
CGGTTAAAAA CTATTAATCC GTCATTCGCT CTCGAAACCT CGGACCTGAC GGAGGTATCA
GAGTTCAAGG ATTTCCTGAC GAAAGACGAG TTTATTCTCC TGAAAGGCAA CCTTTCGAAC
CGCGATATTC TGCGGGATGC ACTGTCAATG TTGCGGGCCT CTGCCGATTC ACAAACCAGC
TTCGACCACG TTCGTTTTGG CCAGTTGTTA AACGACCACC AGGCCAATTT ACGCGATGCG
CAACGCATTT CGACGCCGAA AATAAACCGC ATGATCGACG CGGCTCTTTC AGCGGGTGCC
CTGGGCGGTA AAATTAATGG TTCGGGTGGT GGCGGTTGTA TGTTTGTCTA CGCGCCCGAC
AAGCCAGAAG CGGTTGCCGA AGCCATTGAG CGGGAGGGCG GAAAAGCATT TGTGATCAAC
GTTGCCGAAG GAACCAGCGT ATCGGCTGAG TAA
|
|---|
| Protein sequence | MTLSVDTNSI KVSTPGRICL FGEHQDYLGL PVIAAAISRR IQVATHRVDQ RGFRLNLPDI
NDTVNIPFDG QELPYPQIRD YFRSAVNVLL REGFTFQKGI EGEVHGNIPI NSGTSSSSAL
LVSWLNVLTQ LSDQATQLSA EQIAELAYMA EVLEFGEPGG MMDHYSTAVG NVIYLESQPK
IRLEKLTPPL GAFVLGDSQE PKDTIGILSR VKVGMLDIIQ RLKTINPSFA LETSDLTEVS
EFKDFLTKDE FILLKGNLSN RDILRDALSM LRASADSQTS FDHVRFGQLL NDHQANLRDA
QRISTPKINR MIDAALSAGA LGGKINGSGG GGCMFVYAPD KPEAVAEAIE REGGKAFVIN
VAEGTSVSAE
|
|---|
| |