Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0836 |
Symbol | |
ID | 8724567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1013144 |
End bp | 1014286 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003385694 |
Protein GI | 284035764 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATC AGTTAAAACT AACCTTTTAC CAAAAAGTCC AGTTAGCGGC TAATGTATTT GTCATTTACT GGCCACTCCG TTTTTATATT ACCTTAGAAT CCTTCGACTG GAATAGAGTA GGGCCTTTTA TTGTGTGCAT CTGGCTCCTT GAAATTCCCA TTACCATCGC TCTTTTCACC GGCTGGCTGG GCCTGACGGA GTGGGTCGAA AACAACTTAT TCAAGTGGGA TAAACGACTG TTCCGGCGAG ACGGCAAACT GGCTACCCAA CTAGCCACGT TGTTGATTGC CGGTATGTTG TCGGTGGGCT TTGACTGGGC CTTCTTCGGC TTGCTTAACC AGGCCAGGAC AGTCTTCGAC AAGAGTGACA GTCCCATTTC TTCACCTAGA ACGAATTCTA CGCGCCCGGT AGTCGAGCAA AACGGCGGCA GACCCGAACC TAAACCAGGG CGAAGAGCAA TCACTGCCTT AACGATCATG GCGTTGTTAA TGGCCTATTA TCTAGCGGCC AACCGGCGGG GCGATAACAT GGTAGCTCAG TTACAGCTGA AGGGCGAGCA GTTAAAACGG GAAGCCTATC AGGCCCAGTT TGACGCCTTA AAAAATCAGG TCAATCCCCA CTTCCTGTTT AATAGCCTGA GTATCCTTTC CTCACTGGTC GATACCAGTC CTAAACTGTC CATTCAGTTT ATCAACCAGC TCTCAAAAGC CTACCGCTAC ATTCTGGAAC AGCGGGATTC GCAGCGAGTC CAATTGAAAA CGGAACTGGA ATTTCTGGAG GTTTACTGTT TTCTGTTGAC CATTCGGTTT GCCGATAAGC TCAAACTCAT CAACACCGTT TCCGCCGGGG AAGCCCTCCA GTTTCAAATT GCCCCTTTAA CCCTGCAACT GCTCCTGGAA AATGCCGTTA AGCATAACCG GATGACCCCT AAGCAGCCCC TGACCGTAAC GCTGTCCATT CAGGACAATT ACTTAGTCAT CAGTAATCCA ATTCAGTTAC GCCTACCGGA TGAAATCTTT AAGGCGGACT CCACCGGCAT TGGACTCACC AATATTACCA ATCGGTATCG ATTACTCACC GAACATCCCG TACGGGTGAC CCAATCGGAT ACTACTTTTA GCGTCAGTAT ACCCCTTTTG TAA
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Protein sequence | MADQLKLTFY QKVQLAANVF VIYWPLRFYI TLESFDWNRV GPFIVCIWLL EIPITIALFT GWLGLTEWVE NNLFKWDKRL FRRDGKLATQ LATLLIAGML SVGFDWAFFG LLNQARTVFD KSDSPISSPR TNSTRPVVEQ NGGRPEPKPG RRAITALTIM ALLMAYYLAA NRRGDNMVAQ LQLKGEQLKR EAYQAQFDAL KNQVNPHFLF NSLSILSSLV DTSPKLSIQF INQLSKAYRY ILEQRDSQRV QLKTELEFLE VYCFLLTIRF ADKLKLINTV SAGEALQFQI APLTLQLLLE NAVKHNRMTP KQPLTVTLSI QDNYLVISNP IQLRLPDEIF KADSTGIGLT NITNRYRLLT EHPVRVTQSD TTFSVSIPLL
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