Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0705 |
Symbol | |
ID | 8724435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 860262 |
End bp | 861005 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Shikimate dehydrogenase substrate binding domain protein |
Protein accession | YP_003385567 |
Protein GI | 284035637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.681902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.688441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGTT ACGGCCTGAT CGGCTTTCCG CTTACGCATT CGTTCTCCAA ACGGTACTTT ACCGAAAAAT TTATCCGTGA AAATATCTCC GACAGCCAGT ATGAACTGTT CGAGATGCCG GATCTTTCTA CCCTACCCGA TTTACTCGCT ATGCCCGGCC TGCGTGGGTT AAACGTTACC ATCCCGCATA AACAGGCTGT TCTACCTTAT TTGAATCAGT TAGACCCCTC AGCCGAAAAA ATTGGTGCGG TCAATGTCAT CAAGTTTGAA GCCGATGGCT CACGAACGGG TTATAATTCG GATTATTTTG GCTTTCGGCA ATCGCTGACC GACTGGCTAA CTACTCTAAA TCGTACAACA GAAGGTTTAC AGGCTTTAGT ATTGGGTACA GGAGGTGCCT CAAAAGCCGT GACGGTTGCT TTGGCCGATC TGGGTGTTCC TTTCCGGTAC GTTTCACGTA CGCAAGCAGC CAACACACTA ACCTACGATG GCCTTCCGGG CGTAATGAAC CAGTATGAAT TAATCATCAA TGGTTCTCCG GTTGGTACAT ATCCTCATGT TGAAGCGGCA CCTGCCATTC CGTATGCACA ACTAACCGAA CGCCACTTGC TGTACGACTT AGTGTACAAT CCTGCCGAAA CGACCTTTAT GCAACTTGGT CGCCAGCACG ACGCGGCTGT TCATAACGGG CTACGAATGC TTGAGCTTCA AGCCGAAAAA GCCTGGGAAA TCTGGCAGCA GTGA
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Protein sequence | MTRYGLIGFP LTHSFSKRYF TEKFIRENIS DSQYELFEMP DLSTLPDLLA MPGLRGLNVT IPHKQAVLPY LNQLDPSAEK IGAVNVIKFE ADGSRTGYNS DYFGFRQSLT DWLTTLNRTT EGLQALVLGT GGASKAVTVA LADLGVPFRY VSRTQAANTL TYDGLPGVMN QYELIINGSP VGTYPHVEAA PAIPYAQLTE RHLLYDLVYN PAETTFMQLG RQHDAAVHNG LRMLELQAEK AWEIWQQ
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