Gene Slin_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0669 
Symbol 
ID8724398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp835209 
End bp837350 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content51% 
IMG OID 
ProductTex-like protein protein-like protein 
Protein accessionYP_003385531 
Protein GI284035601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.125717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAT CTGTTGAACA ACGCATTGCT GCCCGGCTTA GCCTACATCT TAAATCGGTA 
GCCGCTACCA TCGAACTACT CAACGGTGGA GCCACCGTTC CCTTTATCGC CCGATATCGT
AAGGAGTTGA CCGCATCCAA TGGTAATCCG CTCGATGAAG TACAAATCGG CCAAATCAAA
GACACCTACC AGAAAATACT CGATCTGGAT AAACGGCGTG AAACCGTAAT CAAGTCCATC
GATGAGCAGG GAAAACTCAC GCCCGATCTC CAAAAGAAGC TTGAATCGAC GGATTCAATG
ACTGACCTGG AAGATCTTTA TCTGCCATTT CGCCAAAAGC GAAAAACACG TGCCACGATT
GCTATTGAAC GAGGACTGGA GCCACTTGCC AACGTAATTC TGGCTCAGCG TGAGGCCTCC
CTCGACCAAA TTGTGCAACG ATACCTTTCC GACGCCGTTG CTACTGCCGC CGATGCTTTG
CAGGGCGCAC GCGATATTCT GGCTGAGCGG ATCAGTGAAA ACGTAGATGC CCGACAGCGT
ATTCGCAACC TGTTTGAACG GGAGGCTATT GTGCGTTCTG TCGTTAAAAA AGGAAAAGAA
GCGGAGGGTG TTAAGTATCG GGATTACTTC GACTTTGCCG AGCCCCTGCG CCGGGTACCC
TCTCACCGCT TGCTGGCCTT GCGTCGGGGT GAGGCCGAGG GGGTCCTGTC TGTAGGCATC
GGACCCGATG AAGAGGCTGC TATTGAACGG CTCGAACGGC AATTTGTTGC CGACCGCTCG
GGGACGCCCG CCTGCAAGGA CCAACTGGCT CTGGCGATCC GTGACGGGTA CAAACGTCTG
CTTAAGCCTT CGCTCGAAAC AGAGTTTGCT AATACGTCTA AAGAGAAGGC TGATGCGGAA
GCTATTCGGA TTTTTGCTGA CAACCTGCGC CAGCTATTGC TCAGCGCTCC TCTCGGTCAG
AAACGTGTTT TAGCCATTGA CCCCGGCTTT CGTACGGGTT GTAAAACAGT TTGTCTGGAC
GCTCAGGGGA ATCTGCTGGC CGATACGGTT TTGTATCTGT CGCACTCAGA TGCCCAACGG
CAGCAGGCGG TGCAAACCGT TCAAAAGCTG GTAAGCCAAT ACAAGATCGA TGCTATCGCT
GTTGGAAATG GTACCGCCGG GCGAGAAACG GAAGAGTTTA TCCAATCGCT TAAACTTGAT
AAACCCATCT TTATTGTCAG CGAACAGGGT GCCTCAATTT ATTCGGCATC CGAGGTTGCG
CGTGAAGAAT TCCCTGATCA TGATGTAACC GTTCGTGGCG CAGTTAGCAT TGGTCGGCGA
CTTATGGACC CGCTGGCCGA ATTGGTGAAA ATCGATCCTA AATCCATCGG TGTTGGTCAA
TACCAGCACG ATGTTGACCA AACCGATCTG AAGACCAGTC TGGATGCTGT TGTTGAGAGT
TGTGTGAATC AGGTTGGTGT TTCGCTCAAT ACGGCCAGTG CTTACTTGTT GCGGTATGTA
TCGGGTTTGG GACCACAACT GGCTGGCAAT ATTGTGGCTT ACCGGGCAGC TAACGGGGCG
TTTTCTTCTC GCGAACAGCT TAAAAAAGTG CCCCGGTTAG GCCCAAAAGC ATTTGAGCAA
TGCGCAGGCT TTTTGCGTAT CGAAGGTGCC AAAAACCCCC TGGATAATAG TGCGGTCCAT
CCAGAGCGGT ATAGCGTTGT GGAGCGGATG GCTGCGGAGG TTGGTAGTCG TGTGGAAGAA
TTGATTATGC GCCCGGACTT ACGTCAGCAG ATTAAAGTTG AAAAGTATGT AACAAACGAG
GTGGGTCTGC CAACGCTTCG GGATATTCTG TCTGAACTTG CCAAGCCTGG CCGCGATCCA
AGGGAGCAGC TTTCGGTCTT TGATTATGAT ACCCGCGTTC GAACGGTTGA TGACCTGCAT
GAGGGTATGG TACTGCCTGG CGTTGTAACA AATATTACAG CCTTCGGTGC TTTCGTGGAC
ATTGGCGTGA AACAGGATGG TTTAGTGCAC ATCTCACAGT TGGCCAACCA TTTTGTTTCT
GACCCGAACA CAGTGGTTAA GGTTTACCAA AAAGTAAAAG TTAAAGTAAT GGAGGTTGAT
AAGGCCCGTA AACGGATTGC ATTGTCTATG AAAATTCAAT AG
 
Protein sequence
MTQSVEQRIA ARLSLHLKSV AATIELLNGG ATVPFIARYR KELTASNGNP LDEVQIGQIK 
DTYQKILDLD KRRETVIKSI DEQGKLTPDL QKKLESTDSM TDLEDLYLPF RQKRKTRATI
AIERGLEPLA NVILAQREAS LDQIVQRYLS DAVATAADAL QGARDILAER ISENVDARQR
IRNLFEREAI VRSVVKKGKE AEGVKYRDYF DFAEPLRRVP SHRLLALRRG EAEGVLSVGI
GPDEEAAIER LERQFVADRS GTPACKDQLA LAIRDGYKRL LKPSLETEFA NTSKEKADAE
AIRIFADNLR QLLLSAPLGQ KRVLAIDPGF RTGCKTVCLD AQGNLLADTV LYLSHSDAQR
QQAVQTVQKL VSQYKIDAIA VGNGTAGRET EEFIQSLKLD KPIFIVSEQG ASIYSASEVA
REEFPDHDVT VRGAVSIGRR LMDPLAELVK IDPKSIGVGQ YQHDVDQTDL KTSLDAVVES
CVNQVGVSLN TASAYLLRYV SGLGPQLAGN IVAYRAANGA FSSREQLKKV PRLGPKAFEQ
CAGFLRIEGA KNPLDNSAVH PERYSVVERM AAEVGSRVEE LIMRPDLRQQ IKVEKYVTNE
VGLPTLRDIL SELAKPGRDP REQLSVFDYD TRVRTVDDLH EGMVLPGVVT NITAFGAFVD
IGVKQDGLVH ISQLANHFVS DPNTVVKVYQ KVKVKVMEVD KARKRIALSM KIQ