Gene Slin_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0528 
Symbol 
ID8724256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp647715 
End bp648911 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content52% 
IMG OID 
Productmethyltransferase 
Protein accessionYP_003385391 
Protein GI284035461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000817153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTT CAAAATTATA TCTGCAGGCC GGACGCGATG AGGCTCTCCG GCGATTTCAC 
CCCTGGGTGT TTTCACGGGC CATCAGTCGG TATGAGGGCA ACCTGAACGA CGGCGATGTC
GTTGAAGTAT TTGACAGCAA AAAGAACTAC CTCGCCACCG GCCATTACCA CGATGGCAGT
ATTGCCGTAC GTATTTTCTC CTTCAATGCA ACGGCTGGCG GACCCGTAAC GCCCGACTTA
CCGTACTGGA CAAAGAAACT GGCGCACATC CGGTCTATTC GAAAAGTGAT TGTAACGGGC
GAAACAAACT GTTATCGACT TGTTCACGGC GAGGGCGATG GTTGCACGGG TCTGATTCTG
GACATGTACA ACGGTGTCAT CGTTCTACAG GCGCATTCCA TTGGTATGCA CCGGGAGCGG
GAAATCATTA CCGACGCGCT GAAAGTCGTT TTTGGTGATG AACTCAAGGC AGTATATGAC
AAAAGTGCCG AAACGCTGCC CGACGAATAC GGTGCCACTG TAACGAATGG CTATCTGTAT
GGCCGTACAC CCGTCCCGCA TCCGGTGCTG GAAAACGGGA ATACGTTTAT GATCGACTGG
ATAACCGGGC AGAAAACGGG CTTTTTCTTA GATCAGCGCG ATAACCGGGC ATTACTGGCC
CAGTATGCTG AAGGAAAAAA AGTATTGAAC GCCTTCTGTT ATTCGGGTGG CTTCTCGGTG
TACGGGCTCA AAGCGGGCGC TACGCTGGTG CATTCGGTAG ATGTTTCTCA GAAAGCAATC
ACCCTTACGG AACAGAATAT AACAGCCAAC TTTGGGGAAA GTGATGATCG GCACCAGGCA
TTTGCGGAGG ATGTCATGCA TTACCTCAAA AACCATGATC AACAGTACGA TGTCGTGGTG
CTTGATCCAC CAGCTTTTGC TAAAAGCCAG TCGGCACGGC ACCGGGCAGT GCAGGGCTAT
AAACGTCTAA ATGCCGAAGG TTTCAAGCGG GTAGCCAAGG GAGGGCTATT GTTCACCTTT
TCCTGTTCGC AGGTGGTGGA CCGCGAGTTG TTCTACAATA CAATTGTGGC AGCGGCCATT
GAAGCCGGTC GGCAGGTACG GGTGCTGCAT CACCTAAGCC AACCCGCCGA TCACCCCGTT
AGTTTATTTC ACCCGGAGGG CGGTTACCTG AAAGGACTGG TCTTGTGGGT AGAGTAA
 
Protein sequence
MTFSKLYLQA GRDEALRRFH PWVFSRAISR YEGNLNDGDV VEVFDSKKNY LATGHYHDGS 
IAVRIFSFNA TAGGPVTPDL PYWTKKLAHI RSIRKVIVTG ETNCYRLVHG EGDGCTGLIL
DMYNGVIVLQ AHSIGMHRER EIITDALKVV FGDELKAVYD KSAETLPDEY GATVTNGYLY
GRTPVPHPVL ENGNTFMIDW ITGQKTGFFL DQRDNRALLA QYAEGKKVLN AFCYSGGFSV
YGLKAGATLV HSVDVSQKAI TLTEQNITAN FGESDDRHQA FAEDVMHYLK NHDQQYDVVV
LDPPAFAKSQ SARHRAVQGY KRLNAEGFKR VAKGGLLFTF SCSQVVDREL FYNTIVAAAI
EAGRQVRVLH HLSQPADHPV SLFHPEGGYL KGLVLWVE