Gene Slin_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0420 
Symbol 
ID8724148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp524951 
End bp526222 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAAA ATPase central domain protein 
Protein accessionYP_003385283 
Protein GI284035353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.781835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG ACTCAACGCC ACTACCCGAG CGGGTGCGCC CACAAACACT GAATGATGTT 
ATTGGCCAAC GTAAGCTGAT TGGCCCAACG GGCGCACTTC GGCGGGCGGT AGATGCCGGA
CGTTTACCAT CCATGATATT ATGGGGGCCG CCGGGTGTGG GTAAAACGAC ACTGGCTCTT
TTGCTGGCAG AGGCCGTTAA GCGGCCATTC ATTGCGCTGA GTGCCATAAA CTCGGGCGTA
AAAGAGATTC GTGACGTACT GAGTCGACCC AGCGGGATGT TTCCGCCGGT TGTTTTCATC
GACGAAATTC ACCGTTTCAA CAAAAGCCAG CAGGACGCAC TGCTGGGTGC CGTTGAGAAA
GGACAGATTA CCCTCATTGG TGCCACGACC GAAAACCCAT CGTTCGAAGT AAACAGCGCG
TTGCTATCAC GCTGTCAGGT ATACATCCTC GAAGCCTTAA GTCGTGAAGA GCTTATCCAG
CTCGTAGACC GGGCTATTGC ACAGGATAGG TTTTTGCAGT CGAAACAGAT TACTGTTGAG
TCGTATGACG CCCTTTTACG GCTATCGGGT GGCGACGGGC GCAAGCTGTT AAACCTGCTG
GAACTGGTGG CATCGGCACA TGTGGCGGCT GAACCGTTGG TTATAACGGA TGAAGGTGTA
ACGGCTGTAG CCCAGCAAAA CATTGCCCGG TATGATAAAT CCGGGGAACA GCATTACGAT
ATTATTTCGG CCTTTATCAA GTCGCTGCGT GGTTCCGACC CCAATGCCGC CCTGTACTGG
ATGGCTCGCA TGATCGTGGC GGGTGAAGAC CCGATCTTTA TTGCCCGGCG TATGCTCATC
ATGGCATCGG AAGATATTGG CAACGCCAAC CCAACGGCTA TGATTATGGC TTCCGAAGCG
GTACAGGCTA TTCGGGCCAT TGGTATGCCC GAAGGCCGGA TAATTCTATC GCAGGTGGCA
GTATATCTGG CTACATCACC CAAGAGCAAT GCGAGTTATG TAGCCATCGA CGAGGCTATG
GCGCTGGCTG AGCAGACGGC CCATTTGCCC GTGCCTTTAC ATCTGCGCAA TGCACCCACC
AAACTGATGA AACAGATTGG CTATGGAAAA GAGTATCAGT ATGCCCACGC CCACGAAGGA
AACTTTGCCC AGCAGAACTT TCTGCCCGAC GATCTAAAAG GGCATAAACT CTATGAACCC
GGTCATAACG CCCGCGAAGC CGAAATCCGA CGGAGCCTGC AAAAATGGTG GGGCGACTGG
TATGGCTATT AA
 
Protein sequence
MNTDSTPLPE RVRPQTLNDV IGQRKLIGPT GALRRAVDAG RLPSMILWGP PGVGKTTLAL 
LLAEAVKRPF IALSAINSGV KEIRDVLSRP SGMFPPVVFI DEIHRFNKSQ QDALLGAVEK
GQITLIGATT ENPSFEVNSA LLSRCQVYIL EALSREELIQ LVDRAIAQDR FLQSKQITVE
SYDALLRLSG GDGRKLLNLL ELVASAHVAA EPLVITDEGV TAVAQQNIAR YDKSGEQHYD
IISAFIKSLR GSDPNAALYW MARMIVAGED PIFIARRMLI MASEDIGNAN PTAMIMASEA
VQAIRAIGMP EGRIILSQVA VYLATSPKSN ASYVAIDEAM ALAEQTAHLP VPLHLRNAPT
KLMKQIGYGK EYQYAHAHEG NFAQQNFLPD DLKGHKLYEP GHNAREAEIR RSLQKWWGDW
YGY