| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0306 |
|---|
| Symbol | |
|---|
| ID | 8724034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 395970 |
|---|
| End bp | 397052 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_003385169 |
|---|
| Protein GI | 284035239 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAAA CCGACATATC AACTCAGAAA GCAACGCTTT TCAGCGACGC TCGAACCCTG
CTCAAACGGC TCATTGCGAC TCCATCGTTC AGCCGGGAAG AAGCGAATAC GGCGGCTGAA
ATCGAAGCGT TTTTCCAGAA TAGACAGATT CCCTTTCAGC GACTTAAACA TAATATCTGG
GCCAGTAATC GGCATTTTAA TGCTGCCAAG CCAACGATTC TGCTGAATTC GCACCATGAT
ACGGTAAAGC CTAACAAATC CTGGACGCTC GATCCGTTTG AGCCGCTGGA ACGTGACGAG
AAGCTCTTTG GTCTGGGCAG TAATGATGCA GGTGGGTGTT TGGTTTCTCT GTTGGCTACC
TTCGCCTACT TTTATGACCG GCCCGACATG AAGTACAATA TCGTGATGGC CGCCACTGCC
GAAGAGGAAA TTTCAGGTCG CGACGGACTG GAACTACTAC TGCCCGAACT ACCGCCTATC
AATTTTGCCG TGGTTGGTGA GCCAACCGAA ATGCAACTTG CTATTGCCGA AAAGGGGCTG
CTTGTACTCG ATTGTACGGC GAGGGGTATT AGTGGACATG CCGCCCGGGA CGAAGGAGAT
AACGCCATTT ACAAAGCCAT TCAGGATATA AACTGGCTAA CAACCTACCA ATTTCCTAAG
GTTTCGCCCA CGTTGGGGCC AATAAAGCTT TCTGTGACGA TCATCAATGC GGGCACACAG
CACAATGTTG TACCTGATAC CTGCACATTT ACGGTGGATG TACGAGTGAC CGAGCAATAT
ACCCTGGAAG AAGTCATTGA GACGATCCAG GCCAATGTAC AGGCTGAAGT AAGGCCGCGC
TCAATCCGGC TCAAGCCGTC GTCTATCCCC GATGATCATC CAATCGTACT GGCGGGTCTT
GCTTTGGGTC GACATACGTA CGGCTCGCCA ACCACATCGG ATCAGGCGGT GTTGAACTGC
CCATCCCTTA AATGTGGACC CGGTCACTCA GGGCGGTCGC ACTCGGCAGA TGAATTCATT
TACCTGCGCG AGATTGATGA AGGTATAAAT GGCTACATCA GTATGCTGGA ACAGGTAGTC
TGA
|
|---|
| Protein sequence | MLQTDISTQK ATLFSDARTL LKRLIATPSF SREEANTAAE IEAFFQNRQI PFQRLKHNIW
ASNRHFNAAK PTILLNSHHD TVKPNKSWTL DPFEPLERDE KLFGLGSNDA GGCLVSLLAT
FAYFYDRPDM KYNIVMAATA EEEISGRDGL ELLLPELPPI NFAVVGEPTE MQLAIAEKGL
LVLDCTARGI SGHAARDEGD NAIYKAIQDI NWLTTYQFPK VSPTLGPIKL SVTIINAGTQ
HNVVPDTCTF TVDVRVTEQY TLEEVIETIQ ANVQAEVRPR SIRLKPSSIP DDHPIVLAGL
ALGRHTYGSP TTSDQAVLNC PSLKCGPGHS GRSHSADEFI YLREIDEGIN GYISMLEQVV
|
|---|
| |