Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0228 |
Symbol | |
ID | 8723956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 302334 |
End bp | 303101 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | protein of unknown function DUF28 |
Protein accession | YP_003385092 |
Protein GI | 284035162 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.595421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTTC GTATAGAATC ATTATACATT ATTTACTTTA CATTATTCAC CACAATGGGA CGCGCATTTG AATACCGGAA AGCCCGGAAA ATGAAACGGT GGGGGCAAAT GGCTAAGACC TTCACCCGTA TTGGTAAAGA TATTGTCATG GCCGTGAAAA GCGGTGGTCC CGACCCCGAT AGTAACGGAC GGCTGCGGGC CATTATCCAG AACGCCAAAG CGGCCAACAT GCCGAAAGAA AACGTCGACC GGGCCATCAA AAAAGCTTCG TCGAAAGAGC AGGAGGACTA CAAAGAAATT GTGTACGAAG CCTATGCGCC CCACGGTATA GCGCTGGTAA TTGAGACGGC TACGGACAAC CATAACCGTA CGGTAGCCAA CGTTCGGAGT TACCTGAACA AACTCGGCGG CAGCCTGGGC ACGCAAGGTA TGCTCGATTT TATGTTCGAC CGCAAATCAG TGTTTCGGAT TACGGCTGAA GGCATCGACC AGGAAGAGCT TGAGCTCGAA CTGATCGACG TGGGTGGTGA CGAAGTTGAG TTTGACGAAG AAGCCGGTCA GTATGTTATC TACGGCGAGT TTACAGCCTT TGGAAGCATC CAGAAGTTTC TTGAAGAAAA AGGCTATGAA ATCAAACAGG CCGAGTTCGA ACGGATTCCG AACGATTACA AAGAGCTAAC CGACGAGGAG GTTGCCGATG TAGAGAAGCT CATCGAACGA ATTGAAGAAG ACGATGATGT TCAGATGGTT TATCACAATA TGAAATAG
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Protein sequence | MPVRIESLYI IYFTLFTTMG RAFEYRKARK MKRWGQMAKT FTRIGKDIVM AVKSGGPDPD SNGRLRAIIQ NAKAANMPKE NVDRAIKKAS SKEQEDYKEI VYEAYAPHGI ALVIETATDN HNRTVANVRS YLNKLGGSLG TQGMLDFMFD RKSVFRITAE GIDQEELELE LIDVGGDEVE FDEEAGQYVI YGEFTAFGSI QKFLEEKGYE IKQAEFERIP NDYKELTDEE VADVEKLIER IEEDDDVQMV YHNMK
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