Gene Slin_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0222 
Symbol 
ID8723950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp294934 
End bp296142 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content52% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003385086 
Protein GI284035156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0751337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.686886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTACAT CAACGTTTAA ATCCTTGCTA CTCGACTCAA CAGTTGCCTC GTCTCTAAAT 
CCGTTTCAGT CATTTTGGTG GGGTGGTTAT GAATGCAGCG ATCAACTGAA CTGCTTTGGC
CACCGCGTAG ACCTACTCCG GGAATCAGGT CATTTGCAAT TACTCAACGA AGACTACGCC
CTTCTTCACT CGTTTACTAT TCGTACCGTC CGGGAGGGTA TTCAATGGAG CCATGTTGAA
AAACGTCCCT ACCAGTACGA TTGGAGTATG GTTGCCGATA TGCTGGCTGA AGGCCATCGG
CAGGGTATTC AGCAGATTTG GGATTTATGC CATTTTGGCT ACCCCGACGA TCTGACGCCT
TTGCACCCCC TGTTTTCCCG TCGGTTTGCC GCTTTGTGCC GGGCATTCGT TCACTTCTAC
CGCGATCTTT ACCCAGACGA TGTCCTGATC GTCACGCCCA TTAACGAAGT AAGTTTCATG
TCGTGGCTAG GGGGTAATGC GGCTGGAACA ACGCCTTATT GTACCAAACA GGGCTGGGAG
GTGAAAGTCG GGCTGATGCG CGCCTACATT GAGGGCGTAG CGGCTATGCG CGAGATCGAC
CCCACCATTC GTATTCTGAC AACAGAACCG CTGGTACAGA TGGTCCCCCC CCTGAACGCG
ACCCCGGAGC AGATTATTGA TGCCGCCATT GCCGATGAAA ACCAGTTTCA GTCGGTCGAT
ATGCTGGCAG GCCGCCTAAC CCCTGAATTG GGTGGGTCGC CAGACTACGT CGACATATTG
GGGTTCAATT ATTATTACAA TAACCAGTGG ATTGAGGGTA CAGAAACATT TTTAGGCTGG
AATGACGCTG TACCCGACTC GCGCTGGGTA TCGCTTCGGC ACTTGCTTAT AAAGGCCTAC
AGACGCTACG AGCGCCCTAT TGCCCTTACA GAAACCAGCC ATCCGGGTAT TGACCGCCCG
TTCTGGATCG AAATGATTGG CCGGGAATGT GCGGCCGTTA GGGAGGCAGG GGTTCCGCTA
GTAGGTGTCT GTTTATACCC AATTGTTGAT CGCCCTGACT GGGATCATAC CGACCATTGG
CATCACTCCG GTCTTTGGGA TGCGGATTTA TCGACTACCC CACCCGGCCG GGTCCTGGTT
GAGCCCTACG CCAATGCCTT ACGACAGGCA CAGTCGGTTA TTTTGGAAGC CAGCTTACCT
ATCAGTTAA
 
Protein sequence
MSTSTFKSLL LDSTVASSLN PFQSFWWGGY ECSDQLNCFG HRVDLLRESG HLQLLNEDYA 
LLHSFTIRTV REGIQWSHVE KRPYQYDWSM VADMLAEGHR QGIQQIWDLC HFGYPDDLTP
LHPLFSRRFA ALCRAFVHFY RDLYPDDVLI VTPINEVSFM SWLGGNAAGT TPYCTKQGWE
VKVGLMRAYI EGVAAMREID PTIRILTTEP LVQMVPPLNA TPEQIIDAAI ADENQFQSVD
MLAGRLTPEL GGSPDYVDIL GFNYYYNNQW IEGTETFLGW NDAVPDSRWV SLRHLLIKAY
RRYERPIALT ETSHPGIDRP FWIEMIGREC AAVREAGVPL VGVCLYPIVD RPDWDHTDHW
HHSGLWDADL STTPPGRVLV EPYANALRQA QSVILEASLP IS