Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0191 |
Symbol | |
ID | 8723919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 256510 |
End bp | 257214 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_003385055 |
Protein GI | 284035125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.20678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTA TTTTGATTTT AGAGGACAAT CTTCTTGATA AAATAAAATT GAAGGGAATG CTAAGGGAGC TTGAGTATAT GAACATTAGT ACAGTGTCCA CCATAGAGCA AGCCCAACAG ATCATTACTA CCCAACCTCC TTTGTTGCTT ATCGTTGATG TATACTTAGA AGGAGAAACC GGTACCGATA TTATTGATAC AGCCCTGGCC AACTCTGTTC CAATTCTATT CGTTTCGGCT TCGAAAGATA TTGCTATATA CAATGGTATA CCGAATAAAC ATCTGTATGG TTACCTGACA AAACCAATCG ACCCTATAAC CCTTCATGCA ACAATCAACC TGCTGACAAA CAAACAAACG ATAACTGTAA GTGAGGTACT TTCATCGGCC ATGTTCATTA AGCAGGGTAA AAAAGAGCAT AAAACATCCT ATTCGGACAT TGTGTGGTTG GAAGCAGAAG GGAACTACAC CTTCATATAT AGCTTATCTG GAAAGCAGGC CATCAAAAAA TCATTGCGTC GTGTGATCGA AGAGCTGGAT TATCGGTTTG CCCAATGCCA TAAGAAATAT TGTGTTAACC TACAGTACGT TACGTATGTT AGGCGGAATG CCGTTCGGGT CAATGACAGG GAAATCCCAA TGACCTATTT TTATAAAAAA AACTTTCTGG ATAAACTGCA CAAATTGGAA GAAATGACCA ATTGA
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Protein sequence | MNTILILEDN LLDKIKLKGM LRELEYMNIS TVSTIEQAQQ IITTQPPLLL IVDVYLEGET GTDIIDTALA NSVPILFVSA SKDIAIYNGI PNKHLYGYLT KPIDPITLHA TINLLTNKQT ITVSEVLSSA MFIKQGKKEH KTSYSDIVWL EAEGNYTFIY SLSGKQAIKK SLRRVIEELD YRFAQCHKKY CVNLQYVTYV RRNAVRVNDR EIPMTYFYKK NFLDKLHKLE EMTN
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