| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37820 |
|---|
| Symbol | |
|---|
| ID | 8635415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4224871 |
|---|
| End bp | 4227543 |
|---|
| Gene Length | 2673 bp |
|---|
| Protein Length | 890 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | membrane carboxypeptidase (penicillin-binding protein) |
|---|
| Protein accession | YP_003316499 |
|---|
| Protein GI | 269797044 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.603691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGCT CGACTGGACG ACCTCCGCAG CGCCCGGCAG GCACCACGCC TGTCCGGGTC
TCTGCCACCT CTCGTGCCAC CGGTACGCCT GGCACCCCCG GCGCAGCCGG CACGCCCCGC
CCGACCGGCA CGCCCCGCCC CGCCGCAGCG ACGACCGCGA CCGCAGCCAG CGCCCCGGGC
GCGCGCGGCG CGAAGACCAC GGCCGGCAGC AAGGCCACGA CAGCCACCAA GACCACGGCC
GGCACCAAGA GCGCCGCGGG CTCCAAGGCT GCCAAGAAGG GTGCCGCCAC CAAGGCCGGC
GCCGGCAGTG GCAAAGGCGG CAAGGGCGGC AGCGGGAAGC GGTTCTTCAA CTACCCCCGC
TACGGCAAGG GCCCGATCCG ACGCTGGCTG CCCTCGTGGC GGTTCCTCCT CGGCTCCTTC
CTCACGATGA TCGCCCTCGT GTGCGGCATC GTCATCGCCG CCTACGTCGG CCTCAAGGTG
CCCACCCCCA GCGACGTCAC CCTCCCGCAG TCCTCGACGG TGCTCTACGG CACCGGCCAG
ACCATGACGG TGTTCGCCGA CCAGGACCGC GAGGTCATCC CCGGCGCCGA CATCCCGCAG
CACGTCCGCG ACGCCGTGGT CTCGGCCGAG GACAGGTCCT TCTACGACAA CTCCGGGATC
GACCCCCGAG GGATCGCCCG CGCCTTCATC GGCAACATCC AGGCGACGAT CAACGGCGGC
CGGATCACCG GTGGTTCGAC GATCACGCAG CAGTACGTCG AGCGCTACTA CACGGGCGAG
ACGATCGACG GCTACGCCGG CAAGTTCAAG GAGATGCTCC TCGCGGTCAA GATCGACCGG
CAGGAGAAGA AGGAAGACAT CCTCGCGAAC TACCTCAACA CCATCTACCT GGGCCGTGGT
GCCTACGGCA TCGAGATCGC CGCGCAGAAG TACTTCGGCG TCTCGACCGG AGACCTCACC
GTCGCCCAGG CCGCGCTCAT CGCCGGGATC ATCCCGGCTC CGTCCGCCTG GGACCCGCAG
AAGAACCCGG AGAAGGCCGA GGAGCGATGG AACTACGTGC TCGACGGCAT GGTCTCCGAG
GGCTTCCTCA CGAAGGCCGA GCGTGACCAG CAGACCTTCC CGGAGACCAT CGCCTACGAG
CAGACGAACC GGAAGCAGGG CCCGCAGGGC TACCTCATCG ACATGGTCGA GCGTGAGCTC
GCGGCGCTCC CGGAGCCCAT CACCCGCGAG GACCTCGACA GCGGTGGCCT GACGGTCCGC
ACGACCATCG ACGCCGGCCT CCAGGAGATG GCGCTGCAGG CGGTCGCGGA GATGCCCGCG
GATGCCGCGC CGAACCTGCG GAAGTCGCTC GTGACCGTCG ACCCCGAGAC CGGGGGCTAC
CTCGCGGTGT ACGGCGGGGC CGACTTCCTC GAGTCGCAGT TCAACAGCGC CACCATGGAC
GTCGCCCAGG CAGGATCGAC CTTCAAGCCC TTCACGCTCA TGGCGGCCCT CGAGGACGGC
AAGACGCTCA AGGACACGTT CGACGGCAAC AACAACAAGT TCTTCCCGGC GGAGAACTAC
ACGGGTCGGA ACTTCTCGAA CCAGAGCTTC GGTCGGGTGA CCCTCGAGAG GGCGACGCAG
GACTCGATCA ACACCGCCTA CCTCGAGCTG AACGAGGAGA TCGGACCGGA GGCCACGGTC
GACGCCGCCA TCAGGGCGGG CATCCCCGAG GGCTCGACCG ACCTGTCGCC CGTCCTGGTG
AACGTGCTGG GGGTCGCCTC GGTGCACACC GTCGACATCG CCCGCGCCTA CACGACCTTC
GCCGCGGGGG GCGAGAAGAA GTCGACGCAC ATCGTGGCGT CGGTGACCAA GAAGGTCGAC
GGAGAGGACG CCGTCGTCTA CACGGAGAAC ACGTCGACCG GCGAACAGGT CTTCACGCCG
GAGAACACCG CCGAGCTCAC CTACGCACTC ACCCAGGTGG TGCAGAACGG CTCGGGCACC
ACCGCGAAGA GGCTCGGCGT GCCGATCGCG GCCAAGACCG GCTCGACCAA CGACAACAAG
GCTGCCTGGT TCGCCGGGTA CACGCCGGAC TTCGTCACAG TGGTCTCGAT GTTCCAGGTC
GGGCCGAACG GCGAGCAGGA GTCCATCACG CCCTTCGGTG ACTACGTCAA CAAGGAGATC
ACCGGTGCGA CCGCGCCGGC AGACCTGTGG ACCGACTACA TGGGCAAGGT CCTCCAGGGG
CGCGACGTCA AGCAGTTCCC GGAGCGCCCA GCGCCGCCCA CCCCGACCTG GACGCCCCCG
CCGACGCCGA CCGAGGAGCC CGAGCCCACG ACGGCCCTCG TACCCGACGG CCTCGTCGGC
AGCTCGCGCG ACGCGGCTGC CAACGCCATC GCGGCCGCCG GGCTGACCCC GGCGGTGACC
GAGCAGTTCG ACGTGAACCC TGCCGGCACG GTGATCGGGG TGAACCCCGG CTCGGGTGCG
GAGGTCGAGC CCGGCTCGAC CGTGACGATC ATCGTCTCGG CCGGCCCCGA GCCGGCGGCC
CCGCCGCCCG CGCCAGAGCC GACCCCGGAC CCGACGACGC CTGCTCCGGA GCCCACGACA
CCGGAGCCGG AGCCGACGGT GCCCGAGGAG CCAGACCCAT CGACCGGGAC CGCACCTCCG
GAAGACCCAG GCGACGCCGC CCCGGCAGGT TGA
|
|---|
| Protein sequence | MASSTGRPPQ RPAGTTPVRV SATSRATGTP GTPGAAGTPR PTGTPRPAAA TTATAASAPG
ARGAKTTAGS KATTATKTTA GTKSAAGSKA AKKGAATKAG AGSGKGGKGG SGKRFFNYPR
YGKGPIRRWL PSWRFLLGSF LTMIALVCGI VIAAYVGLKV PTPSDVTLPQ SSTVLYGTGQ
TMTVFADQDR EVIPGADIPQ HVRDAVVSAE DRSFYDNSGI DPRGIARAFI GNIQATINGG
RITGGSTITQ QYVERYYTGE TIDGYAGKFK EMLLAVKIDR QEKKEDILAN YLNTIYLGRG
AYGIEIAAQK YFGVSTGDLT VAQAALIAGI IPAPSAWDPQ KNPEKAEERW NYVLDGMVSE
GFLTKAERDQ QTFPETIAYE QTNRKQGPQG YLIDMVEREL AALPEPITRE DLDSGGLTVR
TTIDAGLQEM ALQAVAEMPA DAAPNLRKSL VTVDPETGGY LAVYGGADFL ESQFNSATMD
VAQAGSTFKP FTLMAALEDG KTLKDTFDGN NNKFFPAENY TGRNFSNQSF GRVTLERATQ
DSINTAYLEL NEEIGPEATV DAAIRAGIPE GSTDLSPVLV NVLGVASVHT VDIARAYTTF
AAGGEKKSTH IVASVTKKVD GEDAVVYTEN TSTGEQVFTP ENTAELTYAL TQVVQNGSGT
TAKRLGVPIA AKTGSTNDNK AAWFAGYTPD FVTVVSMFQV GPNGEQESIT PFGDYVNKEI
TGATAPADLW TDYMGKVLQG RDVKQFPERP APPTPTWTPP PTPTEEPEPT TALVPDGLVG
SSRDAAANAI AAAGLTPAVT EQFDVNPAGT VIGVNPGSGA EVEPGSTVTI IVSAGPEPAA
PPPAPEPTPD PTTPAPEPTT PEPEPTVPEE PDPSTGTAPP EDPGDAAPAG
|
|---|
| |