Gene Sked_37050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37050 
Symbol 
ID8635338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4138059 
End bp4138916 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003316425 
Protein GI269796970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.557179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC ACGACGAACC CGTCATCACC TCGTACGCGC AGGCACCGGC CCGCACCGTC 
ACCGCGGGCG GCGTGACCTA CGCCTACCGC GAGCTCGGGC CGAAGGGCGG CATCCCCGTC
GTCTTCTTCG TCCACCTCGC CGCGACGCTC GACAACTGGG ACCCGCGCAT CGTGGACCCG
ATCGCGCAGG GCCGCCATGT CATCGCCTTC GACCAGCGTG GGGTCGGGGC GTCCACGGGG
AGCGTCCCGA AGACGATCGA GGAGGCGGCG GACGACGCCT ACACCTTCAT CAGGGCCCTG
GGGCACGAGA CGATCGACAT CTTCTCGTTC TCGATGGGCG GCATGATCGC GCAGGACCTG
GTGGTCAAGC ACCCCGAGCT CGTGCGCCGA CTCGTGCTCA CGGGCACCGG CCCCCGGGGC
GGCAAGGACA TGGACAAGGT CGTGCGCACC ACGTACTACG ACGTCCTGCG CGCCACGCTG
ACCCGCTCCG ACCCCAAGGA GTTCCTCTTC TTCAACCGCA ACGCGACGGG CAAGCGTGCT
GCGAAGGCGT TCGTGCAGCG CCTCGGAGAG CGCACCGTCG ACCGAGACGC GAAGATCTCG
ACCAAGGCGT TCCAGACCCA GCTCAGCGCG ATCAAGAAGT TCGGCCTCTC GGCCCCGTCG
GACCTGTCGG TCATCACGCA GCCCACGCTC ATCGCCAACG GCGACAACGA CCGCATGGTC
CCCTCGGTGC TCTCCGAGGA CCTGCACCGC CGGATCGCGG GGTCCGAGCT GATCATCTAC
CCGGACTCCG GTCACGGCGG CATCTTCCAG TTCCACGAGA CGTTCGCCCC CGTCGCGGTG
AGGTTCCTCG CGCCCTGA
 
Protein sequence
MSTHDEPVIT SYAQAPARTV TAGGVTYAYR ELGPKGGIPV VFFVHLAATL DNWDPRIVDP 
IAQGRHVIAF DQRGVGASTG SVPKTIEEAA DDAYTFIRAL GHETIDIFSF SMGGMIAQDL
VVKHPELVRR LVLTGTGPRG GKDMDKVVRT TYYDVLRATL TRSDPKEFLF FNRNATGKRA
AKAFVQRLGE RTVDRDAKIS TKAFQTQLSA IKKFGLSAPS DLSVITQPTL IANGDNDRMV
PSVLSEDLHR RIAGSELIIY PDSGHGGIFQ FHETFAPVAV RFLAP