| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37010 |
|---|
| Symbol | |
|---|
| ID | 8635334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4134739 |
|---|
| End bp | 4135326 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003316421 |
|---|
| Protein GI | 269796966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.545642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCA CCATGGTCAG CCGTCAGGAA TCCGCCGCCG CCACCCGCCG TGCTCTGCTC
GACGCCACCC GAGAGCTCCT CGCCGAGGGA GGTCAGCAGG CCGTCACGCT CCGCGAGGTG
GGAGCACGCG CGCACGTGTC CCGGGGGGCC GCCTACCGTC ACTTCGCGGA CAAGGAGAGT
CTCCTGGCGG CGGTCGGGGC GGAGAGCTGG GACCGGATCG CCGAGGAGCT GGCTGGCCTG
GGGGAGCCCG AGGCGGGTGG GGCCGCCGCC GGGCTGCGGG CAGCCCTGGG GGCGCTGCTG
ACGGTGAGCC GCGAGGAGCC CGAGGTCTAC CGGATGATGT TCACGATGCC GGCCCAGGAC
CCGGAGCTCG CCATCCGGGC GGCGGGGCGC GCGCAGGACG AGTTCTTGAG GATTGTCGGG
ACGGTCGTCG GCGACGAGCG GGCGCACCTC TACGGCGCGA TGCTCCTGAC GAGCGTGCAC
GGGATCGCGA GCATGCACGC CAGCGGTCAC CTCGACCCGC AGATGTGGCA GACCACCCCG
GACGACCTCG TCGAGGCGCT GGTCGCGCTC GTCACCCGCG AGGGCTGA
|
|---|
| Protein sequence | MIVTMVSRQE SAAATRRALL DATRELLAEG GQQAVTLREV GARAHVSRGA AYRHFADKES
LLAAVGAESW DRIAEELAGL GEPEAGGAAA GLRAALGALL TVSREEPEVY RMMFTMPAQD
PELAIRAAGR AQDEFLRIVG TVVGDERAHL YGAMLLTSVH GIASMHASGH LDPQMWQTTP
DDLVEALVAL VTREG
|
|---|
| |