Gene Sked_36250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36250 
Symbol 
ID8635258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4054230 
End bp4055483 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316345 
Protein GI269796890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.324604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGGA CCACAGGCAA GAAGCAGGCA GCGGTGAGCG GACCGTCCGA CGGTGCGCAC 
GGACCGCAGG GCATCGAGCT GCGCAAGGCC CGCGGGCTGT GGATGATGCC GCTGGTGCGC
GGTCTCCTGC TCATCCTGCT GGGCCTGCTG CTCATGGTGC AGCCGCTCGG CACCCTCGAC
CGCCTCATCA TGCTGTTCGC GGTGTTCCTC GTGCTCGACG GCGTGGTCGC GGCGGTCCAG
GGGCTCGTGA ACCGGGACCA GATCGGGTGG CGCTGGTGGT TGGTCCAGGG TGCGGTCGAC
GTGGTCTTCG CCGTGATCAT CCTCGTGTGG CCGGGCGCGA CGGCGCTCGT GCTCTTCTAC
CTGCTCGTCG TGTGGACCCT CGTCCTGGGT GTCGCGGCGA TCGCCGGGTC GGTCGCGCTG
GTCCGCAACC GTGACCTCGG CTGGCCGTGG CTGCTGACCA TCGGTCTGCT GTCCACGCTG
TTCGGCTTCT TGCTCGTGAC CCGCTCGCAG GACGGCGCCG CGGCGCTCGA GCTCGTGACG
GTGGTGTTCG GCATCTACGC CTTCGTCAGC GGCGCCGTGC ACGTGGTGTC GGTGTTCGCG
ATCCGCTCGG TGGCGCAGGA GATCGACCGC GCCCTCACCG GCCAGAGCCT CGTGGTCGAC
GCGATGGCCG CCCGCCAGGT CGCGGCCCGC GAGGCCGCCG AGGAGCGCGC CCAGGCCCGT
GCGACGGCGA CCGCCGAGAA GAAGGCGGAG AAGAAGGCCG CCAAGGAGGC CGGGCGCGGC
GACGGCGACG CACCGCGGGC GGCGCGCGAC ACGAAGGTCA TCCACCTGCC CGACGAGTCG
CACGACTCGC ACCCTGCTGG TGGGAGCAGC ACGCGTGACG AGGGGGCGGC CCGAGACCGT
GCTCACGTCG ACGAGGAGCG TGTCTACGAC GACGAGCTCG CGGCGACGGG CTTCCCGGAC
AGCCCCGGGG TCGTCTCCGC GCCGCCCGCG GTCGTCCCCG ACGAGGAGCG GTCCGGCAGG
GTCCCGGCGC GCACGGACCG GGCACAGCCG GTGAGCAGCA CGACCCCCAG CCCTGCCAGC
CCAACCAGCC CTTCCAGCAC TCCCAGCACC GACAGCTCGA AGGTACCGGC GAGCGCCCCC
TACGACGTCG AGGCAGACGC GGCGACCGCC GCCGAGGCTG ACGCTGCCGC CGGTCCCCAC
GAGACCTCGG CATCGCAGTC TCCGCCCGAG GGTGGACCCG CTCCACGCAC CTGA
 
Protein sequence
MARTTGKKQA AVSGPSDGAH GPQGIELRKA RGLWMMPLVR GLLLILLGLL LMVQPLGTLD 
RLIMLFAVFL VLDGVVAAVQ GLVNRDQIGW RWWLVQGAVD VVFAVIILVW PGATALVLFY
LLVVWTLVLG VAAIAGSVAL VRNRDLGWPW LLTIGLLSTL FGFLLVTRSQ DGAAALELVT
VVFGIYAFVS GAVHVVSVFA IRSVAQEIDR ALTGQSLVVD AMAARQVAAR EAAEERAQAR
ATATAEKKAE KKAAKEAGRG DGDAPRAARD TKVIHLPDES HDSHPAGGSS TRDEGAARDR
AHVDEERVYD DELAATGFPD SPGVVSAPPA VVPDEERSGR VPARTDRAQP VSSTTPSPAS
PTSPSSTPST DSSKVPASAP YDVEADAATA AEADAAAGPH ETSASQSPPE GGPAPRT