Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_34580 |
Symbol | |
ID | 8635091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3864624 |
End bp | 3865052 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | predicted transcriptional regulator |
Protein accession | YP_003316180 |
Protein GI | 269796725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00510828 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.627972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACAG CACCGAGCGT CACCCCGGCG CTCTCGCCGC ACGACACGCA CGAGCACCAC GACCACCCGG AGGTCGGCCC CGCGCACCGC GACCTCATCG CCCAGGTGCT CGACACCTGG TCGCTGCAGG TGCTCGCCGA GCTCTGCGAC AGGCCGTCGC GGTTCAACGA GCTCCGTCGG GCGATCCCCG CCGTCACGCA GAAGTCGCTC ACCGCGACCC TGCGCCGGCT CGAGCGCAAC GGCGTCGTCG CCCGCGAGGT CGTCGCCACC CGCCCGGTCG CGGTCCGCTA CAGCATCACG CCCCTCGGCA AGACCTTCCG GGAGCCGGTC GACGCGCTCC TCGCCTGGAC CACAGCGCAC ATGGCGGACG TCGAGCAGGC CCGTGAGGCC TTCGACGACG CCACCGACGC CGAGCACGAC GTCAGGTAG
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Protein sequence | MRTAPSVTPA LSPHDTHEHH DHPEVGPAHR DLIAQVLDTW SLQVLAELCD RPSRFNELRR AIPAVTQKSL TATLRRLERN GVVAREVVAT RPVAVRYSIT PLGKTFREPV DALLAWTTAH MADVEQAREA FDDATDAEHD VR
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