Gene Sked_34500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34500 
Symbol 
ID8635083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3855917 
End bp3856798 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID 
Productabortive infection bacteriophage resistance protein 
Protein accessionYP_003316173 
Protein GI269796718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.10172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.641113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAG GTCTGACGGT GGAGCAGCAG GTTGCGCTCC TCGCCCAGCG CGATCTCGTC 
ATCGACGACG AGGCTGCCTG CAGGACGTTC CTCGTCTCGT GCAACTACTA CCGGCTCTCT
GGCTACGCTC GATACTTCCA GCGCGCCCCG CACCTCGGCG ACGACACGTT CAAGCCAGGA
ACGACCTTCG AGGACGTCCG CGCTGCCTAC GTCGCCGACG AGGCACTGCG TGAGGCCCTC
GGCAAGTCTC TCGCTCGTGT CGAGCTCATG CTGCGGACGC ACGTAGCACG CGTGATCGCC
GACGCGCACG GACCCTACGG GAGCTTCCTC GAGGAGCGCT TCTACACCGA CGTCGGCGAC
GCCGAGCCGA CAGTCGAGTC GCTCCTCCGC GACATCAGGC GAAGCAAGGA CCGTCACATC
CTGCGATATC TGGACGGCGA CGACTTCAGC AGGCTCCCCG TATGGTCCGC CGTAGAGGCC
TGGTCCTTCG GGACCTTGTC TCGAGCGGTC GAGCGAGGAG CGAGAGGGTC TCTCTCCGAC
TCCGTGGCCA CCAGCGCCGG GATCGCAAAG GCCGGGTTCG CCTACCGCGT CAGATCTCTG
GTCTACCTCC GCAACCGGTG CGCCCATCAC AGCCGCCTGT GGCACCACTC AGTCCTCGAC
GCGGGGCCGA CACCGAACAA CGTCCGGAAG AAGGCGAAAC GACTCGCAGG ACAGTTCGAG
CCGCGCTCCG TCCTCGACGT CGTCGCCTCG CTGGACGACA TGGCCTCGCG CGGGAACGCC
GCCGACCCCG TGCTCCCTCT GCTCCTGGAA CGCCACACTC GGGACTCCGT GTTCTGGAAG
GGTCTGGCCC GTCCGCAGAG CCCGCGAGAC CACAGCGCCT GA
 
Protein sequence
MKPGLTVEQQ VALLAQRDLV IDDEAACRTF LVSCNYYRLS GYARYFQRAP HLGDDTFKPG 
TTFEDVRAAY VADEALREAL GKSLARVELM LRTHVARVIA DAHGPYGSFL EERFYTDVGD
AEPTVESLLR DIRRSKDRHI LRYLDGDDFS RLPVWSAVEA WSFGTLSRAV ERGARGSLSD
SVATSAGIAK AGFAYRVRSL VYLRNRCAHH SRLWHHSVLD AGPTPNNVRK KAKRLAGQFE
PRSVLDVVAS LDDMASRGNA ADPVLPLLLE RHTRDSVFWK GLARPQSPRD HSA