| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31640 |
|---|
| Symbol | |
|---|
| ID | 8634797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3523034 |
|---|
| End bp | 3523813 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Uracil-DNA glycosylase |
|---|
| Protein accession | YP_003315895 |
|---|
| Protein GI | 269796440 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.720517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACG ACCCGCACGA CGGCGCGCAC CACGACACCG ACCACGACAC CCACCACGGC
GAGACCGCGG CCCTCAGCCC CTCCGCGCAC CGGCGCAGCC TGCTCGACGA CGTGGCCCCG
GACTGGGCCC TCGCCCTTCG CCCCGTCGCC GAGGTCGTCG ACCGCCTCGA CGACGAGCTC
CTCGCGAGTG CGGCGCCCGG CGACGTCCTC CCGGCCCGCG AGGACGTCAT GCGGGCCTTC
CGTGAGCCTC TCGCCGACGT CAAGGTGCTC GTGGTCGGGC AGGACCCCTA CCCCACCCCC
GGCCACGCCA TGGGGCTGTC CTTCTCCGTC CAGCCGCACG TCCGCCCACT CCCACGGTCG
CTGGCCAACA TCGTCACCGA GCTCCACGAC GACCTGGGGC TGCCGGCCCC CGCGACCGGC
GACCTCTCCC CGTGGTCGCG TCAGGGCGTC ATGCTCTGCA ACCGGGTGCT CACCGTCGCC
GCCGGCGACG CGGGGTCGCA CCGCCGTCGG GGCTGGGAGC AGGTGACCGA CCGTGCCATC
CAGGCGCTCG TCGAGCGCGG CGGTCCGCTC GTCGCCGTCC TCTGGGGACG AGACGCGGCC
ACGCTCCGGC CCGCCCTCGG CGACGTGCCC GTCGTGGAGT CGGCGCACCC CAGCCCGCTG
TCAGCACGCC GCGGGTTCTT CGGCTCGCAC CCGTTCTCGG CGGTCAACGA CCTCCTCGTC
GCGCAGGGAG CCAGCCCCGT CGACTGGTCG CTGCCCGCCT CGGACGACGC GCTCTTCTGA
|
|---|
| Protein sequence | MAHDPHDGAH HDTDHDTHHG ETAALSPSAH RRSLLDDVAP DWALALRPVA EVVDRLDDEL
LASAAPGDVL PAREDVMRAF REPLADVKVL VVGQDPYPTP GHAMGLSFSV QPHVRPLPRS
LANIVTELHD DLGLPAPATG DLSPWSRQGV MLCNRVLTVA AGDAGSHRRR GWEQVTDRAI
QALVERGGPL VAVLWGRDAA TLRPALGDVP VVESAHPSPL SARRGFFGSH PFSAVNDLLV
AQGASPVDWS LPASDDALF
|
|---|
| |