Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_30460 |
Symbol | |
ID | 8634680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3388772 |
End bp | 3391036 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003315780 |
Protein GI | 269796325 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0534112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.427386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACCCAT GGGATCCCCC ACCCGCGGCA CCCCCAGCCG CCCCCGAGCA CGACGGCTCG CCGCCTGCGC GGGCGCCGTC GGAGCCGCGA TGCTCGGCAC CACCCTGGTC GCCGCGGCGC CCGCCCCCCG CAGCGACGGG TGCCGGTGCA CCTGCCGCCG CCGTCGCCCC CGCTGCGGTC GCCGCGGCGC CCACGCCCGA GCAGACAGCC GTCCTCGAGC GGTACGTCAC CGACACCTAC GCCTCGCTCG CCGCGATGAC CGACGACACC ACCGGTCTGC CCGCCGACAA CATCGGGGGA GACCTCGACC CCGCGAGCGC GTCCGCCTAC ACCTCGCCGA CCAACATCGG CGGGTACCTG TGGTCCACGG TGATGGCCCG CGACCTCGGC ATCGTCACCG TCGACGAGGC CTACGACCTC ATGAGCACCA CCCTCGCCAC CGTCGAGGGC CTCGACCGCC ACGAGCCCAG CGGCATGTTC TACAACTGGT ACGACCCGGC CACCGGTGAG CGGGTGCGGA ACTGGCCCGG CGACGGGGTG GTCGTCGACC AGTTCCTCAG CTCGGTCGAC AACGGCTGGC TCGCCGCAGC GCTGCGCGTG GTCGCCGAGG CCGAGCCGCG GCTCGCCGAC GAGGCCACCG CCGTCTACGA CGACATGAAC TTCGGTGCCT TCTACAACGC CGACGCCCTC CCCGACCGCG GCCTCGGTCT GCTCCGCGGC GGGTTCTGGG ACGAGGTCCA GACCGAGGGC TCGGTCCCCG GGGACTACCT CGGGACCGGC ACCGAGGTCT TCTACACCGG GCACCACTAC GACACGCAGG TGTCCGAGAC GCGCATCGCC ACCTACCTGG GCATCGCCGA GGGCGACGTC CCGCCCGAGA CGTACTACGC CACCTGGCGC ACCTTCCCCG CCTCGTGCGA CTGGGCGTGG CAGGAGTCGC GCCCGAGCGG CGTGACCCGC AGCTACCTCG GCGTCGACGT CTTCGAGGGT GCGTACAGCT ACCGCGGCAT GTCGATCGTC CCGGGCTGGG GCGGGTCGAT GTTCGAGGCA CTCATGCCCG ACATGCTCGT CCCCGAGTCC GAGTGGGGCC CCACGTCGTG GGGCGTCAAC CACCCGCTGT TCGTCGAGGC GCAGAAACAG CACGGCATGG ACGAGGCCGG CTACGGCTAC TGGGGCTTCT CCCCGGCGTC CAACCCCTTC GGCGGCTACG CCGAGTACGG CGTCGACCAG CTCGGCATGC GCGACGACGG GTACCTCTCC GACGGCGTCA CCGACGTCGA CGTCGACCGC TTCGGCTGCA CCGAGGGCAC GAACCCTGAC CCCGAGTACC AGGACGGCGT CGTCACGCCC CACGCGTCGT TCCTCGGGCT GTCCTACGAC CCCGAGGGCG TGCTCGCCAA CCTGGCCGCC CTCGAGTCGG ACTTCGACTC CTACGGCCCC GGCGGCTTCT ACGACTCGAT CGCCGTCCGC TCCGGCACCG TCGCCGAGAA GTACCTCTCC CTCGACCAGT CGATGATCGT CGCCGCGGTC GGCAACTACC TGCTCGACGG CGCCCTCCAG GACTACTTCG TCGACGAGCA GCTCGAGACG GCCCTGCGCC CGCTCATGGA GGCCGAGGTC TTCGCCGCCT CCGCCGAGCC CGTCGTCCCC GTCCTCGCGG CACCGGCCGC GGGCACGGTC CTCACCGACC CGCGCACCAC GTTCTCCGGG ACCGGCGAGC CCGGCGCGGA GCTGACGGTC AGCGCGACCC CGGTCGACGC GACGCTGCCC GAGGGCGACG CCGTCCCCGA GGTGGACGTA GCGCCCGAAG CCGACGCCGC GGCGCTCGCG GCCCAGACGC TCTGCACAGC TGCGGTCGAC GCCGAGGGGG CCTGGTCCTG CGACGGTCAG ACGGCGCTCG AGCCGGGCAC CTACGTCCTC GCGATCTCGA CGACCAGCAC CGCGGGCGTC ACCGTCCCGG GTGCGGCCGA CGTGACCGTC GAGGTCGCAG CGGTCCCGAC CGAGGAGCCG ACGACGCCGG TGCCGACAGA CCCGGCACCG ACCGATCCTG CACCGGTCGC CCCGGCCCCG ACCGACCCGG CGCCCGGGAC CGACCCTGAC GCCGCGGTGC CGGGCGACGG ATCCGGCGCG GCGGACGGCG CTCCTGGCAG CGACCTCGCG CAGACCGGGG CGGGCGGCAC CGTGCCGCTG GTCGTGCTCG GGGCCTTCGC GATCCTGCTC GGTGCCGCCG CGGTCGTCCT CGTCCGGACG CGTCGCCGGG ACTGA
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Protein sequence | MHPWDPPPAA PPAAPEHDGS PPARAPSEPR CSAPPWSPRR PPPAATGAGA PAAAVAPAAV AAAPTPEQTA VLERYVTDTY ASLAAMTDDT TGLPADNIGG DLDPASASAY TSPTNIGGYL WSTVMARDLG IVTVDEAYDL MSTTLATVEG LDRHEPSGMF YNWYDPATGE RVRNWPGDGV VVDQFLSSVD NGWLAAALRV VAEAEPRLAD EATAVYDDMN FGAFYNADAL PDRGLGLLRG GFWDEVQTEG SVPGDYLGTG TEVFYTGHHY DTQVSETRIA TYLGIAEGDV PPETYYATWR TFPASCDWAW QESRPSGVTR SYLGVDVFEG AYSYRGMSIV PGWGGSMFEA LMPDMLVPES EWGPTSWGVN HPLFVEAQKQ HGMDEAGYGY WGFSPASNPF GGYAEYGVDQ LGMRDDGYLS DGVTDVDVDR FGCTEGTNPD PEYQDGVVTP HASFLGLSYD PEGVLANLAA LESDFDSYGP GGFYDSIAVR SGTVAEKYLS LDQSMIVAAV GNYLLDGALQ DYFVDEQLET ALRPLMEAEV FAASAEPVVP VLAAPAAGTV LTDPRTTFSG TGEPGAELTV SATPVDATLP EGDAVPEVDV APEADAAALA AQTLCTAAVD AEGAWSCDGQ TALEPGTYVL AISTTSTAGV TVPGAADVTV EVAAVPTEEP TTPVPTDPAP TDPAPVAPAP TDPAPGTDPD AAVPGDGSGA ADGAPGSDLA QTGAGGTVPL VVLGAFAILL GAAAVVLVRT RRRD
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