Gene Sked_30420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30420 
Symbol 
ID8634676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3384441 
End bp3384920 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003315776 
Protein GI269796321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.147448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.274535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAG AGAGCACCAC CGCGCACCCC GCCAGCCAGC CCCACGACCG GGCGACCCTC 
GGCGGAGACC TCGTCGTCGC CTGCTCCCGG TTCGCCCGGA CGGCAGCGCA GGCGATCGAC
GTCGACGTGT CGGTCACCAT GTGGCGCATG CTCTCGAACC TCGCGCACAG CGGAGACCTC
AGCGTGACCG AGCTCGCCGC GATCGAGCGC ACCTCGCAGC CGACCGTCTC GAAGATGGTC
AAGCGCCTCG AGGCCCAGGG GCTCGTGTCC CGACGACCCG ACCCCATCGA CCGACGGTCC
AGCGCCGTCT CCGTCACCGA CGCAGGACGG GCCGCCCTGG CCCGCTACCG CGCGTCCCTC
ACGACGGCCC TCGCCCCCCA CCTCGCCGGG CTCGACGAGG ACGACCTGCG CACGCTCGAC
CGTGCGCTCG ACCTCCTCGC CCGTCTCACC AGCGAGGTGG CCGACGCAGG ACCCATCTAG
 
Protein sequence
MTAESTTAHP ASQPHDRATL GGDLVVACSR FARTAAQAID VDVSVTMWRM LSNLAHSGDL 
SVTELAAIER TSQPTVSKMV KRLEAQGLVS RRPDPIDRRS SAVSVTDAGR AALARYRASL
TTALAPHLAG LDEDDLRTLD RALDLLARLT SEVADAGPI