Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_30120 |
Symbol | |
ID | 8634646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3349889 |
End bp | 3351160 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | Major Facilitator Superfamily transporter |
Protein accession | YP_003315747 |
Protein GI | 269796292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.657204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGTCCC CCGCAGCCGG TACGCACCCG CGGGCGTGGC TCGCGGTGTG CGGCGTGCTC TTCTCCGTCG CCTGGGGCGG CAACGAGTTC ACGCCGCTCC TGGTCCTCTA CCGCCTCGAG GGCCTCTCGG CGCAGTCCGT CAACGTGCTG CTCGCCGCCT ACGTGGTCGG CATCGTCCCG GCCCTGCTGG TCGGCGGCCC GCTGTCCGAC CGCCTCGGGC GCCGGCCGCT CATGCTCCCG GCACCGCTGC TCGGAGTCGT CGGCAGCGGG CTCATCGCGT GGGGCGCGCA CCTGCACGCG CTGCTCTTCG CCGGGAGGGT CTTCTCCGGG CTGGCGCTCG GGCTCGTGAT GGCCGTGGGG ACCAGCTGGG TCAAGGAGCT CTCGCAGCCA CCGGTCGCCT CCGCAGCCGA CGCGGGCAGC GGTGCGCGTC GTGCCGCGCT CTCGCTCACC GCGGGCTTCG GGCTCGGTGC CGTCGTCGCC GCTGCCCTCG CGCAGTACGG CCCCCTGCCG ACGCTGCTCC CCTACCTCGT CAACATCGCC GTCACCGTGG TGCTCGCCGT CCCCGCGCTC TCGGCTCCCG AGACGGTCGC CCGCCAGGCC GACCCGGGTC GCTTGCGGGA CGACCTGCGC ATCCCGGCCG CCCGGCACCG ACGCTTCCTG CTCGTGGTCC TGCCGATGGC GCCCTGGGTC TTCGCCGTGG CGGCCTGCGC CTACGCGATC CTGCCGGCGC TCGTGGCCCA CCGGGTCCCC GGCGACGAGA TCGGCTTCTC GGGGCTGCTC TGCCTCGTGG CGCTGTCCTG CGGCTTCGTC ACCCAGCAGC TGGCGAGGTC TCTCGACACG CCCCGGTCGG CGCGCGCCGT CGTCGTCGCC CTGGCGGTCA CCGTCGTCGG GATGAGCGTC GCCGCGTGGG CCGCGGCGAC CCTCGACCTG CGGGTCACCG TGCTCGCCGC TGCGGTGCTC GGCTGCGCCT ACGGGCTGCT CATGCTCTCC GGGCTCCAGG AGGCGCAGCG CATCGCCGGC CCGGACGACC TCGCCGGGAT CATCGCCGTC TTCTACTCCA TCAGCTACCT CGGGTTCTTC GTGCCGACGG TCTTCGGGGC GCTCTCGGGC TCGGTCAGCT ACCCCGTGAT GCTCGCCGGG GGTGCGGTGC TCGCCGCCCT CTGCCTGCTG GTCGTGGTGC TCGGCTGGAG CCGCCACCTG CCGCAGGGCG CAGGGTCTCC GGGCGGGTCA CATCGTGGAC CGGACCGGGT GAAGATCTCC GCACGACCCT AG
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Protein sequence | MMSPAAGTHP RAWLAVCGVL FSVAWGGNEF TPLLVLYRLE GLSAQSVNVL LAAYVVGIVP ALLVGGPLSD RLGRRPLMLP APLLGVVGSG LIAWGAHLHA LLFAGRVFSG LALGLVMAVG TSWVKELSQP PVASAADAGS GARRAALSLT AGFGLGAVVA AALAQYGPLP TLLPYLVNIA VTVVLAVPAL SAPETVARQA DPGRLRDDLR IPAARHRRFL LVVLPMAPWV FAVAACAYAI LPALVAHRVP GDEIGFSGLL CLVALSCGFV TQQLARSLDT PRSARAVVVA LAVTVVGMSV AAWAAATLDL RVTVLAAAVL GCAYGLLMLS GLQEAQRIAG PDDLAGIIAV FYSISYLGFF VPTVFGALSG SVSYPVMLAG GAVLAALCLL VVVLGWSRHL PQGAGSPGGS HRGPDRVKIS ARP
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