Gene Sked_29450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29450 
Symbol 
ID8634579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3281869 
End bp3282411 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLSU ribosomal protein L17P 
Protein accessionYP_003315681 
Protein GI269796226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0149004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCC CCACCAAGGG TGCGCGTCTC GGCGGAAGCC CGTCTCACGA GCGCCTCATC 
CTCAAGAACC TCGCGACCAG CCTCTTCGAG CACGGCCGCA TCACGACGAC GGTGACCAAG
GCCAAGCGCC TGCAGCCGTT CGCGGAGCGC CTCATCTCGA AGGCCAAGCG CGGTGACCTG
CACAACATCC GCCAGGTCGC CAAGACCATC AACTCCAAGA CGGTCAACCG TCCGGGCGAA
GAGGGCGACG CCGCCACCAC GCTGCACCGC CTCATCACCG AGATCGCCCC GGCCATGGCC
GAGCGCAACG GTGGCTACAC CCGCGTGACC AAGGTCGGCA ACCGCAAGGG CGACAACGCC
CCCATGGCTG TCATCGAGCT CATCCTCGAG CCCGTCAGCC CCAAGCAAGC TGTCGTCCGC
GAGGCCGAGA AGGCCGCCAA GAAGACCGCT CCGAAGGCCG CCAAGGCCGA GGAGACCCCC
GCGGCCGAGG CTCCGGCCGA CGCCGAGGCA CCGGCTGAGG AGTCGTCCGA GAAGGACGCC
TGA
 
Protein sequence
MPTPTKGARL GGSPSHERLI LKNLATSLFE HGRITTTVTK AKRLQPFAER LISKAKRGDL 
HNIRQVAKTI NSKTVNRPGE EGDAATTLHR LITEIAPAMA ERNGGYTRVT KVGNRKGDNA
PMAVIELILE PVSPKQAVVR EAEKAAKKTA PKAAKAEETP AAEAPADAEA PAEESSEKDA