| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_29160 |
|---|
| Symbol | |
|---|
| ID | 8634550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3252693 |
|---|
| End bp | 3254009 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003315652 |
|---|
| Protein GI | 269796197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGT CCGCGCTCGC CAAGCTGCTC GACCAGGAGG CGTGGGCCCT GCTCAACGCC
CTCCCGCCCT ACGAGGAGAA GCTCGCGATG GTCCTCTCCG AACGGCTGCG GGCCAAGGGC
TTCGACCCCG AGGTCGTCGC GCTGGTCCTC ACCCAGTCGC GACTGCGCGC CAAGGCCGAG
CCGAAGTTCG GGCCCTTCGC CGACGGGATG CTGTTCACCC CGGCGGGGCT CGAGCAGGCC
ACACGCCTCG TGGTCGCCGC GCACCACGCG CAGCGCTACC TCGCCGCCGG CATCACCACC
GTCGCGGACC TCACCTGCGG GATCGGTGCC GACTCGATGG CCTTCGCCGG CGTGGGACTC
ACGGTCCTGG CGACCGACCT CGACGAGGCG ACCGCCGCCG TCGCCACGGT GAACCTGCGC
GCCTTCCCCG AGGCCGTCGT CCGTCACGCC GACGGCCTCG CCCTCGACCT CGCCGCCGAG
GGGCTCACCG GCGGCACCGG CGGCATCTAC GCCGACCCGG CCCGCCGCAC CCGTTCCGGC
AAGCGGATCT TCGACCCGAA GGCCTACGCC CCCGCCCTCG ACGACGTCTG GGCGCTCCGC
GACCAGGTCC CGGCCGTCGG CATCAAGGTC GGGCCCGGCA TCCCGCACGA GGGCCTGCCC
CAGGACTGCG AGGCGCAGTG GGTCTCGGTC GACGGCGACG TCGTCGAGGC CGGGCTCTGG
TTCGGCCCGC TGGCCCCCGA CGGCCCCGGA CGATCGGCGC TGCTCCTGCG CACCGACGGC
GGGCAGACCT CCGCACGCAC CTACCGCGGC GACGGCATCG GGACCGGCAC AGGCGAGGGC
GAGACGCTGC CCGACGCCGT CGAGGGAGTC GACGGCGTCG GCCGGTACCT CTACGAGCCC
GACGGTGCCG TGATCCGGGC GGGGCTCGTC GCAGACCTCT CGCGAGAGCT CGACGGCCGG
CTCCTCGACC GCACGATCGC CTACGTCACC ACAGACACCC GGCACGACGA CGCCGGGCAG
GTGCCCCTCG CCACCGGGTA CCGGGTCCTC GACACGATGC CCTTCGGCGT CAAGCGTCTC
AAGAGCTACC TGCGGGCCCG CGACGTCGGC CGCGTGACGA TCAAGAAGCG CGGCACGGCC
GTGACCCCCG AGTCGCTGCG CGCCCAGCTC GCGCTCAAGG GGTCCGCCGA GGCTACGCTC
GTCCTCACCC GGGTCGCCGG CAGCCAGCAG ATCCTGGTCG TCGAGCCCCT CGGGTCCCCG
GCTGCACCCA CCACCACGCC CGGCTCCACG CCCGGCAGCC CGTCAGACTC GGAGTGA
|
|---|
| Protein sequence | MEPSALAKLL DQEAWALLNA LPPYEEKLAM VLSERLRAKG FDPEVVALVL TQSRLRAKAE
PKFGPFADGM LFTPAGLEQA TRLVVAAHHA QRYLAAGITT VADLTCGIGA DSMAFAGVGL
TVLATDLDEA TAAVATVNLR AFPEAVVRHA DGLALDLAAE GLTGGTGGIY ADPARRTRSG
KRIFDPKAYA PALDDVWALR DQVPAVGIKV GPGIPHEGLP QDCEAQWVSV DGDVVEAGLW
FGPLAPDGPG RSALLLRTDG GQTSARTYRG DGIGTGTGEG ETLPDAVEGV DGVGRYLYEP
DGAVIRAGLV ADLSRELDGR LLDRTIAYVT TDTRHDDAGQ VPLATGYRVL DTMPFGVKRL
KSYLRARDVG RVTIKKRGTA VTPESLRAQL ALKGSAEATL VLTRVAGSQQ ILVVEPLGSP
AAPTTTPGST PGSPSDSE
|
|---|
| |