Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_26520 |
Symbol | |
ID | 8634286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2955873 |
End bp | 2957441 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | phage tail sheath protein FI |
Protein accession | YP_003315390 |
Protein GI | 269795935 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.849261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.473283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCTACCT ACACCGCGCC CGGCGTCTAC ATCGAAGAGA TCCCGTCGTC CCAGAAGGTC CTCTCGTCGG CGCCCACCGC CGTCGCAGCC TTCGTCGGCT TCACCGAGCG CGCGCCGCTC GACGACCCGA CCGACCCCGA GGGCCTGGCC CCGAGGCTCG TCACCAGCTG GACCCAGTTC GAGAAGCTCT ACGGCGGGTT CGTCGAGGGC GCCGTGCTGC CCCTGTCCGT CTACGGGTTC TTCCTCAACG GCGGCAGCCT CGCCTACGTC GTGCGCATCC CCAACGTGCA GCCGGCCGGC GAGCCCGCCC GCCTCGCGCT GCCGGCCGTC GACCGTGCGC TCGGCCTGCC GATCGCGGTC GAGAGCATCG AGCCCGACGC GAACATCTCC GTCGCGGTCG AGACGGTCGA GCCCGACGAG GACGTCGACG GCCCCTCCGC CTTCACCATC CGGATCCTCG AGGGCGACGA GGTCGTCGAG AGCTACGAGG ACCTCACCAT CGGTGGGGCC ACCGACGCCG CGACGGTCAT CAACAAGACG TCGACCCGCG TCAAGGTCGA GGTCACCCTC GAGGCCAAGA CGGACCTGTC GAGCCAGCTC GAGATCCTCA AGCCCGGTCT GTACCCGCTC GAGAAGGCCG CCCCGGTCTC GGTGCCCGTC TCCGGACGCA AGTTCGCCGG CTCCGAGAAC GCCCGCACCG GCATCAACGG TCTGGCCATC GCCGAGGACG TGACGATCGT CGCGGTCCCC GACCTGGTCA CCGCCGCGAC CCGCGAGGAC GGCACCCTCG ACCTCGACCT GTGGAAGGCC GTGCAGACCG CGCTCATCGC GCACTGCGAG CTGCACCCCA ACCGCATGGC CATCCTCGAC GCCCCTCCCG GCTTCGGCCC GCAGCAGGTC AAGGAGTGGC GCACCGAGAC CGCGCAGTAC GACTCGGCCT TCGCGACGCT GTACTACCCG TGGATCAAGG TCGAGAACCC GGTCCCCGGC GCCACCCAGG CGGACGTCCT CATCCCGCCG TCCGGCCACG TGGCCGGCGT GTGGGCCCGG ACCGACGACG CCCGCGGCGT GTGGAAGGCC CCGGCCAACG ACACCATCCG CGGCGTGCTC GACGTCGAGC GCTCGATCAC CCAGAACGAG CAGTCGATCC TCAACCCGCT CGGCATCAAC GCGATCCGGC CCTTCGGCAC CCGCGGCATC CGCATCTGGG GCGCGCGCAC CCTCGCCTCG GACACCGACT GGCAGTACAT CAACGTCCGT CGTCTGTTCA ACATGATCGA GTCGACGATC CTCGAGGGCA CCCAGTGGGC CGTCTTCGAG CCCAACGACG TCACGCTGTG GGAGGGCGTC AAGCGAACGC TCACCGGCTA CCTCCACGGC CTGTGGCAGT CGGGCGCACT GTTCGGCGCG AGCGCCGACC AGGCGTTCTT CGTCAACTGC GACTCGACGA CCAACACCCC CGAGTCGATC GACGCGGGCA AGCTCGTCGT CGAGGTGGGG ATCGCGCCGG TCAAGCCGGC CGAGTTCGTG ATCTTCCGCA TCAGCCAGAA CAAGCAGACC GGCAGCTGA
|
Protein sequence | MPTYTAPGVY IEEIPSSQKV LSSAPTAVAA FVGFTERAPL DDPTDPEGLA PRLVTSWTQF EKLYGGFVEG AVLPLSVYGF FLNGGSLAYV VRIPNVQPAG EPARLALPAV DRALGLPIAV ESIEPDANIS VAVETVEPDE DVDGPSAFTI RILEGDEVVE SYEDLTIGGA TDAATVINKT STRVKVEVTL EAKTDLSSQL EILKPGLYPL EKAAPVSVPV SGRKFAGSEN ARTGINGLAI AEDVTIVAVP DLVTAATRED GTLDLDLWKA VQTALIAHCE LHPNRMAILD APPGFGPQQV KEWRTETAQY DSAFATLYYP WIKVENPVPG ATQADVLIPP SGHVAGVWAR TDDARGVWKA PANDTIRGVL DVERSITQNE QSILNPLGIN AIRPFGTRGI RIWGARTLAS DTDWQYINVR RLFNMIESTI LEGTQWAVFE PNDVTLWEGV KRTLTGYLHG LWQSGALFGA SADQAFFVNC DSTTNTPESI DAGKLVVEVG IAPVKPAEFV IFRISQNKQT GS
|
| |