| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23830 |
|---|
| Symbol | |
|---|
| ID | 8634018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2649462 |
|---|
| End bp | 2653103 |
|---|
| Gene Length | 3642 bp |
|---|
| Protein Length | 1213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | condensin subunit Smc |
|---|
| Protein accession | YP_003315131 |
|---|
| Protein GI | 269795676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACCTCA AGACCCTCAC CCTGCGCGGG TTCAAGTCGT TCGCCTCCGC GACGACGCTG
AACCTCGAGC CCGGCGTGAC CTGCGTCGTC GGCCCGAACG GCTCGGGAAA GTCGAACGTC
GTCGACGCCC TCGCCTGGGT GATGGGGGAG CAGGGCGCCA AGACGTTGCG CGGCGGCAAG
ATGGAGGACG TGATCTTCGC CGGCACGTCG GGCCGGCCCC CGCTCGGCCG TGCCGAGGTG
TCGCTGACGA TCGACAACAG CGACGGGGCG CTGCCCATCG AGTACGCCGA GGTGACGATC
AGCCGGACGT TGTTCCGCAA CGGCGGCTCG GAGTACGCGA TCAACGGGTC GTCGTGCCGG
CTCCTCGACA TCCAGGACCT GCTCTCGGAC TCGGGTCTGG GGCGCGAGAT GCACGTGATC
GTGGGGCAGG GACAGCTCGA CGCCGTGCTG CGCGCGACCC CGGAGGAGAG GCGCGGCTTC
ATCGAGGAGG CGGCGGGAGT CCTCAAGCAC CGCAAGCGCA AGGAGAAGGC GCTCCGCAAG
CTCGACGCCA TGCAGGGCAA CCTGCTGAGG CTCACCGACC TCACCGCCGA GATCCGGCGC
CAGCTCGGCC CTCTCGGGCG GCAGGCCGAG GCGGCCCGTC GCGCCGCGGT GGTCCAGGCG
GACCTCCGCG ACGCGAGGTC GAGGCTGCTC GCCGACGACC TCGCCCAGCT CACGGCCTCG
CTCGAGCAGG AGCTCGCGGA CGAGAGCGCC CTGCGTGCTC GGCAGGCCGA GGCAGAGGCC
GCCCTCGAGG TGGCCCGCAC GTCGTTGCGC GAGGCCGAGG CCGGGCTCGC TGCGGCGGGC
CCGGCCGCCG CCGCTGCGAG TGCCACCTGG TACGCCCTCG GGTCCGCGCG GGACCGGCTC
GAGTCGACGC GGTCGCTGGC CGCCGAGCGG GTGCGTCTGC TGAGCGCCCC GGTCGAGCAC
CGCCGTGGCC AGGACCCGGA GGAGCTGGAG GCGCAGGCCG AGCGCGCGCG GGACACCGAG
GACGAGCTCG TCGCCGAGGT CGCCGGGCAC GAGGCTGCCC TGGCCCGGAG CACCGAGCGC
CGCGCAGAGG CAGAGGCAGA GGTCGCGCTC CGTGAGCGGG AGCTCGCGAC CCTGGTGCGG
GGCGCGGCAG ACCGCCGCGA GGGGGTCGCT CGCCTCGCCG GGCAGGTGGC GGCGAAGCAG
TCGCGGGTGG ACGCGACACG CGCCGAGATC GACCGGCTCG AGGACTCGCT GGCCGAGGCC
TCGACCCGTC AGAGCGGAGC GAGCAGCGAG CTCGAGGACC TCGAGTCCGA GGTGATGGAC
GTCGAGCAGG GCCAGGAAGG GCTGGACGCC GCGCACGAGG AGGCGGTCGA GGCGCTCGAG
GGTGCCCTGC ACGCGCTGCG CGAGCTCGAG GCGGAGTCGA GGCAGGCAGC GCAGGACCAC
TCCACCTGGT CCGCGCGGAG CGAGACCCTC GACCTCAGCC TCACCCGCAA GGACGGCGCA
GGCGCCGTGC TCGGGGCGGG CACCCTCGAC GGTGTCGTGG GCTCGGTCGC GGCGCTGCTG
ACCGTCGAGA CGGGCTACGC CGACGCGGTC GTGGCGGCCC TCGGTCCGCT GGCCGACGCG
GTGGCGGTCG AGTCGGTGGG CGCGGCCGTC GAGGTGCTGC GCTACCTGCG GACCGAGGAC
GCCGGGCGCG CGAGCATCGT GCTCGGTGCG CCGGACCAGG CCCCGCAGAC GGGCACCGCT
GTGTCAGCCG CACCTCTGAC ACCTCCTGCG GACCTCCCGG ACGGCGCGGT CGTCGCGTCC
TCGGTGGTCT CGGCCGGGCG TGGTCTCGGC GCGGGCCTGG TCGGCGTGCT GGACCGGACG
ATCGTGGTCG ACGACCTCGT GCAGGCCCGT CGCGTGGTCG AGGCCCACCC GGGGTGGACG
GTGGTGACCC GTGCCGGTGA CCTGCTGTCC TCCGACCGGG CCTGGGGAGG GTCTGCCGCG
GCACCGAGCG TGCTGCACCT GCAGGCTGCG CTCGACGAGG CGCGTGCTGC CGCAGCGGAC
GCCCAGCGTC GTGGCGCGGA CGCGGACCGC CGGCGGGAGA CGGTCGAGCG TGCGGTGCAG
TCTGCCCAGG AGCGTGCCGA CGCCGCGCTC GACCGGCTGC ACGCCTCGGA CGCTGCGCAC
TCTGCGGTCG CCGAGCGCCT CGGGCAGCTC GGCGCGGCAG CCCGGTCGGC CGCCGCGGAG
GCCGTCCGGA CGCAGGAGCG GATCGACGCG GCCACCCGGA CCCTCGCCGA CGACGAGGCA
CAGCTCGTGG AGCTGGTCGC CCGGCTCGAC GCGGCCGAGG CCGACCCCCA GGACACCGAG
GACGCGATCG AGGACGCCAC CCGGGCACGA GACGGTGCTG CCGACGACGC TGCGCAGGCA
CGCGCGGCGG AGACCGAGGC CCGGCTGGCC CTGCGCACGA GCGAGGAGCG CGCCCGTGCG
CTCTCGGGAC GCGCCCAGTC GCTCGAGCGG GCGGCTCGCG CCGAGCGGGA GGCCCGTGAC
CAGGCCGAGC GCCGCGAGGT CGCACGGAGG CGCCAGGTGG TGGTCGCCGA GGCGGTCCGC
GACGGTGCGG CGTCGGCGGC GCGGTACTGC GACGTCTCGA TCGGCCTCGC CACCGTGCGC
CGGGACGAGG CGGAGGCAGA CCGCGGGGCG CGGGACGCGG AGGTGGTGCG CGCCCGGCAG
CGTCAGGACG CGCTCGCCGA AGAGCTGCGG TCGATCACCG ACGTCGCGCA CCGCGACGAG
GTGGCACGTG CCCAGCAGCA GGCGCGGGTC GAGGCGCTGC GCCAGCGTGC GGTCGACGAG
CTCGGCACCG ACCCGGACGT GCTGGTCGAG GAGTTCGGTC CGCACCGGCT GGTGGTCGAC
GCAGAGGTCG CGGCGCAGCA GCGCGCGGAC CACGGAGCGG GGGAGGGCGA CGACCGTCCC
GGGCAGCCCG CCGACGACGA GCCGGTCGGC CGCCCGTACG TCCGGGCGGA GCAGGAGAAG
CGGCTGCAGT CCGCCGAGCG TGCCATGGCA CGGCTGGGCC GGGTCAACCC GCTCGCCCTC
GAGGAGTTCG CGGCCCTCGA GGAGCGGCAC ACCTTCCTCA CGGAGCAGCT GGCCGACCTG
AAGCGGTCTC GCGCCGACCT CCTCGAGATC GTCCGCGAGA TCGACGAGCG GGTCGAGCGG
GTCTTCACCG AGGCCTTCGA GGACACGAGC GCCCAGTTCG ACGAGGTCTT CCCCCGGCTG
TTCCCCGGCG GCGAGGGGCG CCTGGTCCTC ACCGACCCGA CGGACATGCT CACCACCGGC
ATCGAGGTCG AGGCGCGACC GGCCGGCAAG AAGGTCAAGC GGCTGTCCCT GCTCTCGGGC
GGTGAGCGCT CCCTCACGGC GGTCGCGCTG CTCGTGTCGA TCTTCAAGGC GCGCCCGAGC
CCCTTCTACG TCATGGACGA GGTCGAGGCG GCGCTCGACG ACACGAACCT GGGACGGCTG
CTCGAGATCT TCGTCGAGCT CCAGCGCGAC AGCCAGCTGA TCGTCATCAC GCACCAGAAG
CGCACGATGG AGATCGCGGA CGCCCTCTAC GGGGTGACGA TGCGCGGGGA CGGTGTGACC
ACCGTCATCA GCCAGCGGAT CCGGGAGCCC GTCGAGCGGT GA
|
|---|
| Protein sequence | MHLKTLTLRG FKSFASATTL NLEPGVTCVV GPNGSGKSNV VDALAWVMGE QGAKTLRGGK
MEDVIFAGTS GRPPLGRAEV SLTIDNSDGA LPIEYAEVTI SRTLFRNGGS EYAINGSSCR
LLDIQDLLSD SGLGREMHVI VGQGQLDAVL RATPEERRGF IEEAAGVLKH RKRKEKALRK
LDAMQGNLLR LTDLTAEIRR QLGPLGRQAE AARRAAVVQA DLRDARSRLL ADDLAQLTAS
LEQELADESA LRARQAEAEA ALEVARTSLR EAEAGLAAAG PAAAAASATW YALGSARDRL
ESTRSLAAER VRLLSAPVEH RRGQDPEELE AQAERARDTE DELVAEVAGH EAALARSTER
RAEAEAEVAL RERELATLVR GAADRREGVA RLAGQVAAKQ SRVDATRAEI DRLEDSLAEA
STRQSGASSE LEDLESEVMD VEQGQEGLDA AHEEAVEALE GALHALRELE AESRQAAQDH
STWSARSETL DLSLTRKDGA GAVLGAGTLD GVVGSVAALL TVETGYADAV VAALGPLADA
VAVESVGAAV EVLRYLRTED AGRASIVLGA PDQAPQTGTA VSAAPLTPPA DLPDGAVVAS
SVVSAGRGLG AGLVGVLDRT IVVDDLVQAR RVVEAHPGWT VVTRAGDLLS SDRAWGGSAA
APSVLHLQAA LDEARAAAAD AQRRGADADR RRETVERAVQ SAQERADAAL DRLHASDAAH
SAVAERLGQL GAAARSAAAE AVRTQERIDA ATRTLADDEA QLVELVARLD AAEADPQDTE
DAIEDATRAR DGAADDAAQA RAAETEARLA LRTSEERARA LSGRAQSLER AARAEREARD
QAERREVARR RQVVVAEAVR DGAASAARYC DVSIGLATVR RDEAEADRGA RDAEVVRARQ
RQDALAEELR SITDVAHRDE VARAQQQARV EALRQRAVDE LGTDPDVLVE EFGPHRLVVD
AEVAAQQRAD HGAGEGDDRP GQPADDEPVG RPYVRAEQEK RLQSAERAMA RLGRVNPLAL
EEFAALEERH TFLTEQLADL KRSRADLLEI VREIDERVER VFTEAFEDTS AQFDEVFPRL
FPGGEGRLVL TDPTDMLTTG IEVEARPAGK KVKRLSLLSG GERSLTAVAL LVSIFKARPS
PFYVMDEVEA ALDDTNLGRL LEIFVELQRD SQLIVITHQK RTMEIADALY GVTMRGDGVT
TVISQRIREP VER
|
|---|
| |