| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23730 |
|---|
| Symbol | |
|---|
| ID | 8634008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2639404 |
|---|
| End bp | 2640048 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | 16S rRNA processing protein RimM |
|---|
| Protein accession | YP_003315121 |
|---|
| Protein GI | 269795666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.659902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.204427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGA CAGTCGCCAC GATCGGGCGG GCGCACGGGT TGCGCGGAGA GGTCGCGCTC
GACCTCCGCA CCGACGACCC CGAGGCCCGT CTGGCCGACG GGCAGGTGCT GCGCACCGTC
CCGGCCTCCG CAGGACCGCT CACGGTCGTG TCGACGCGCA TCCAGAACGG CCGGTGGCAC
GTCGCCTTCG CCGAGCTCGG GGACCGCACC GCAGCCGAGC AGGCCCGTGG CATCGAGCTC
GTGGTCGACG TCGACGCCTC CGACGAGGAG GACGCCTGGT ACCCCCACGA GCTGGCCGGC
CTGCGCGCCG AGCTCCAGGA CGGGACAGTC GTCGGCGAGG TCGTCGGGCT CGACCACCTG
CCCGCCTACG ACATGCTCGT CGTCCGCGAG ACCGACGGCA CCCGGACCCT GGTGCCCTTC
GTCCGCGTCA TGGTCCCGGT CGTCGACGTC GCCGGGGGGC GCGTCGTGCT CGACCCGCCC
GGCGGGCTGC TCGCCCGGGA CGCCGTGAAC CTCGAGGTCG CCACGCCCGA GGAGGGCTCG
GCTGCCGCTG CCGCTGCCGC TGCCGCTGCC GACGCCGCCG AGGCTGCCGA GGCCGGAGCC
GTCTCGGACG AGCCGCAGGA CGACCCGACC GAGGGTGGTC GCTGA
|
|---|
| Protein sequence | MELTVATIGR AHGLRGEVAL DLRTDDPEAR LADGQVLRTV PASAGPLTVV STRIQNGRWH
VAFAELGDRT AAEQARGIEL VVDVDASDEE DAWYPHELAG LRAELQDGTV VGEVVGLDHL
PAYDMLVVRE TDGTRTLVPF VRVMVPVVDV AGGRVVLDPP GGLLARDAVN LEVATPEEGS
AAAAAAAAAA DAAEAAEAGA VSDEPQDDPT EGGR
|
|---|
| |